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Listing of all 40604 records

genomes Range Mode Median Mean Std dev
40604 1 - 21 7 6.0 5.4 2.8
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCA_000146265.4 Aggregatibacter actinomycetemcomitans D11S-1
Aggregatibacter (genus) 6
GCA_000474035.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_000723365.1 Mycoplasma amphoriforme A39
Mycoplasmoides (genus) 1
GCA_000826905.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_000826925.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_001077535.2 Clostridioides difficile ATCC 9689 = DSM 1296
Clostridioides (genus) 12
GCA_001617585.1 Salmonella enterica subsp. enterica serovar Typhimurium
Salmonella (genus) 6
GCA_001956655.2 Staphylococcus epidermidis
Staphylococcus (genus) 6
GCA_004295685.1 Fluviispira sanaruensis
Fluviispira (genus) 5
GCA_007362955.1 Lysinibacillus fusiformis
Lysinibacillus (genus) 12
GCA_009496995.1 Lysinibacillus sphaericus
Lysinibacillus (genus) 12
GCA_009498715.2 Synechococcus elongatus PCC 11802
Synechococcus (genus) 2
GCA_009648895.1 Cronobacter sakazakii
Cronobacter (genus) 7
GCA_009649975.1 Lysinibacillus pakistanensis
Lysinibacillus (genus) 11
GCA_009665415.1 Vibrio cidicii
Vibrio (genus) 11
GCA_009905295.1 Serratia sp. NGAS9
Serratia (genus) 7
GCA_009936135.1 Candidatus Chazhemtobacterium aquaticus
Bacteria (domain) 1
GCA_013256815.1 Serratia marcescens
Serratia (genus) 7
GCA_013337045.2 Agrobacterium vitis
Allorhizobium (genus) 4
GCA_014302835.1 Pedobacter sp. PAMC26386
Pedobacter (genus) 2
GCA_015100165.3 'Parthenium hysterophorus' phyllody phytoplasma
Mariniplasma (genus) 2
GCA_018866225.1 Candidatus Minimicrobia naudis
Saccharibacteria_genera_incertae_sedis (genus) 1
GCA_020541285.1 Candidatus Gillettellia cooleyia
Enterobacterales (order) 1
GCA_020544305.1 Staphylococcus taiwanensis
Staphylococcus (genus) 4
GCA_022871025.1 Conchiformibius kuhniae
Conchiformibius (genus) 4
GCA_025340205.1 Ignicoccus pacificus DSM 13166
Ignicoccus (genus) 1
GCA_025839675.1 Candidatus Lokiarchaeum ossiferum
Archaea (domain) 3
GCA_026153535.1 Sphingobacterium sp. KU25419
Sphingobacterium (genus) 6
GCA_027594465.1 Candidatus Phytoplasma sacchari
Acholeplasmataceae (family) 2
GCA_027945135.1 Candidatus Phytoplasma oryzae
Mariniplasma (genus) 2
GCA_032834875.1 Sulfuracidifex metallicus DSM 6482 = JCM 9184
Sulfuracidifex (genus) 1
GCA_032843885.3 Pseudomonas aeruginosa
Pseudomonas (genus) 4
GCA_033404635.1 Salmonella enterica
Salmonella (genus) 7
GCA_033676985.1 Providencia sp. PROV236
Providencia (genus) 7
GCA_034643955.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCA_035917515.1 Streptomyces sp. NBC_01799
Streptomyces (genus) 6
GCA_035920325.1 Streptomyces sp. NBC_01744
Streptomyces (genus) 6
GCA_035974395.1 Streptomyces sp. NBC_01310
Streptomyces (genus) 7
GCA_035999765.1 Streptomyces sp. NBC_01231
Streptomyces (genus) 6
GCA_036226585.1 Streptomyces sp. NBC_00708
Streptomyces (genus) 6
GCA_036226725.1 Streptomyces canus
Streptomyces (genus) 6
GCA_036227345.1 Streptomyces sp. NBC_01463
Streptomyces (genus) 6
GCA_038019735.1 Salmonella enterica subsp. enterica serovar Infantis
Salmonella (genus) 7
GCA_038020145.1 Salmonella enterica subsp. enterica serovar Infantis
Salmonella (genus) 7
GCA_038020165.1 Salmonella enterica subsp. enterica serovar Infantis
Salmonella (genus) 7
GCA_038020335.1 Salmonella enterica subsp. enterica serovar Infantis
Salmonella (genus) 7
GCA_038367165.1 Shigella flexneri
Escherichia/Shigella (genus) 7
GCA_038368265.1 Trueperella pyogenes
Trueperella (genus) 3
GCA_038368275.1 Trueperella pyogenes
Trueperella (genus) 3
GCA_038368285.1 Trueperella pyogenes
Trueperella (genus) 3
GCA_038368325.1 Trueperella pyogenes
Trueperella (genus) 3
GCA_038368335.1 Trueperella pyogenes
Trueperella (genus) 3
GCA_038368345.1 Trueperella pyogenes
Trueperella (genus) 3
GCA_038368375.1 Trueperella pyogenes
Trueperella (genus) 3
GCA_038380085.1 Salmonella enterica subsp. enterica
Salmonella (genus) 7
GCA_038380095.1 Salmonella enterica subsp. enterica
Salmonella (genus) 7
GCA_038380105.1 Salmonella enterica subsp. enterica
Salmonella (genus) 7
GCA_038380125.1 Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
Salmonella (genus) 7
GCA_038380135.1 Xanthomonas oryzae pv. oryzicola
Xanthomonas (genus) 2
GCA_038380145.1 Raoultella ornithinolytica
Klebsiella (genus) 8
GCA_038380455.1 Lactococcus petauri
Lactococcus (genus) 5
GCA_038380565.1 Lactococcus garvieae
Lactococcus (genus) 5
GCA_038380635.1 Lactococcus petauri
Lactococcus (genus) 5
GCA_038380755.1 Lactococcus formosensis subsp. formosensis
Lactococcus (genus) 5
GCA_038380785.1 Lactococcus petauri
Lactococcus (genus) 5
GCA_038380845.1 Lactococcus petauri
Lactococcus (genus) 5
GCA_038381215.1 Lactococcus garvieae
Lactococcus (genus) 5
GCA_038381585.1 Lactococcus petauri
Lactococcus (genus) 5
GCA_038381885.1 Salmonella enterica subsp. enterica serovar 4,[5],12:i:-
Salmonella (genus) 7
GCA_038385395.1 Streptococcus pyogenes
Streptococcus (genus) 6
GCA_038386885.1 Streptococcus pyogenes
Streptococcus (genus) 6
GCA_038388625.1 Streptococcus pyogenes
Streptococcus (genus) 6
GCA_038390225.1 Streptococcus pyogenes
Streptococcus (genus) 6
GCA_038390915.1 Streptococcus pyogenes
Streptococcus (genus) 6
GCA_038396715.1 Pediococcus acidilactici
Pediococcus (genus) 5
GCA_902712845.1 Methylobacterium bullatum
Methylobacterium (genus) 4
GCA_902809825.1 Candidatus Hydrogenisulfobacillus filiaventi
Sulfobacillus (genus) 4
GCA_903995505.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCA_903995535.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCA_903995545.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCA_904067005.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCA_905067615.1 Hyphomicrobium sp. MC8b
Hyphomicrobium (genus) 1
GCA_905123105.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCA_905123125.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCA_905123915.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCA_905123925.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCA_905123935.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCA_931185875.1 Lactobacillus delbrueckii subsp. delbrueckii
Lactobacillus (genus) 9
GCA_947036595.1 Mammaliicoccus lentus
Mammaliicoccus (genus) 6
GCA_947044265.1 Salmonella enterica subsp. enterica serovar Kentucky
Salmonella (genus) 1
GCA_947044355.1 Salmonella enterica subsp. enterica serovar Bredeney
Salmonella (genus) 1
GCA_963556565.1 Corynebacterium diphtheriae
Corynebacterium (genus) 5
GCA_963556575.1 Corynebacterium diphtheriae
Corynebacterium (genus) 5
GCA_963556635.1 Corynebacterium diphtheriae
Corynebacterium (genus) 5
GCA_963575565.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCA_963575585.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCA_964019725.1 Spiroplasma endosymbiont of Antitype chi
Spiroplasma (genus) 1
GCA_964019825.1 Spiroplasma endosymbiont of Lasioglossum calceatum
Spiroplasma (genus) 1
GCA_964026385.1 Rickettsia endosymbiont of Polydrusus tereticollis
Rickettsia (genus) 1
GCA_964026435.1 Rickettsia endosymbiont of Gonocerus acuteangulatus
Rickettsia (genus) 1
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.