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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_000725305.1 Escherichia coli KLY
Escherichia/Shigella (genus) 7
GCF_000258025.1 Escherichia coli KO11FL
Escherichia/Shigella (genus) 7
GCF_000284495.1 Escherichia coli LF82
Escherichia/Shigella (genus) 7
GCF_021398935.1 Escherichia coli LF82
Escherichia/Shigella (genus) 7
GCF_000468515.1 Escherichia coli LY180
Escherichia/Shigella (genus) 7
GCF_003586045.1 Escherichia coli M8
Escherichia/Shigella (genus) 7
GCF_034265375.1 Escherichia coli MP1
Escherichia/Shigella (genus) 7
GCF_029542525.1 Escherichia coli NC101
Escherichia/Shigella (genus) 7
GCF_003433275.1 Escherichia coli NCCP15648
Escherichia/Shigella (genus) 7
GCF_000714595.1 Escherichia coli Nissle 1917
Escherichia/Shigella (genus) 10
GCF_003546975.1 Escherichia coli Nissle 1917
Escherichia/Shigella (genus) 7
GCF_021559835.1 Escherichia coli Nissle 1917
Escherichia/Shigella (genus) 7
GCF_043228065.1 Escherichia coli Nissle 1917
Escherichia/Shigella (genus) 7
GCF_002024865.1 Escherichia coli NU14
Escherichia/Shigella (genus) 7
GCF_006777045.1 Escherichia coli O1:H42
Escherichia/Shigella (genus) 7
GCF_030347135.1 Escherichia coli O1:K1:H7
Escherichia/Shigella (genus) 7
GCF_030347155.1 Escherichia coli O1:K1:H7
Escherichia/Shigella (genus) 7
GCF_013282315.1 Escherichia coli O10:H32
Escherichia/Shigella (genus) 7
GCF_015571795.1 Escherichia coli O100:H21
Escherichia/Shigella (genus) 7
GCF_041870065.1 Escherichia coli O102:H6
Escherichia/Shigella (genus) 7
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.