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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_000022345.1 Escherichia coli BW2952
Escherichia/Shigella (genus) 7
GCF_002079225.1 Escherichia coli C
Escherichia/Shigella (genus) 7
GCF_000007445.1 Escherichia coli CFT073
Escherichia/Shigella (genus) 7
GCF_014262945.1 Escherichia coli CFT073
Escherichia/Shigella (genus) 7
GCF_000023365.1 Escherichia coli DH1
Escherichia/Shigella (genus) 7
GCF_000270105.1 Escherichia coli DH1
Escherichia/Shigella (genus) 7
GCF_003697165.2 Escherichia coli DSM 30083 = JCM 1649 = ATCC 11775
Escherichia/Shigella (genus) 7
GCF_000167875.2 Escherichia coli E110019
Escherichia/Shigella (genus) 7
GCF_000831565.1 Escherichia coli ECC-1470
Escherichia/Shigella (genus) 7
GCF_000800215.1 Escherichia coli ER2796
Escherichia/Shigella (genus) 7
GCF_000210475.1 Escherichia coli ETEC H10407
Escherichia/Shigella (genus) 7
GCF_017570685.1 Escherichia coli H20
Escherichia/Shigella (genus) 7
GCF_047344975.1 Escherichia coli HB101
Escherichia/Shigella (genus) 7
GCA_048814835.1 Escherichia coli HB101
Escherichia/Shigella (genus) 7
GCF_000017765.1 Escherichia coli HS
Escherichia/Shigella (genus) 7
GCF_000026265.1 Escherichia coli IAI1
Escherichia/Shigella (genus) 7
GCF_000026345.1 Escherichia coli IAI39
Escherichia/Shigella (genus) 7
GCF_000025745.1 Escherichia coli IHE3034
Escherichia/Shigella (genus) 7
GCF_000493755.1 Escherichia coli JJ1886
Escherichia/Shigella (genus) 7
GCF_001593565.1 Escherichia coli JJ1887
Escherichia/Shigella (genus) 7
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.