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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_008153345.1 Treponema phagedenis
Treponema (genus) 2
GCF_013348685.1 Treponema phagedenis
Treponema (genus) 2
GCF_017161245.1 Treponema phagedenis
Treponema (genus) 2
GCF_017161285.1 Treponema phagedenis
Treponema (genus) 1
GCF_000214375.1 Treponema primitia ZAS-2
Treponema (genus) 2
GCF_000755145.1 Treponema putidum
Treponema (genus) 2
GCF_024400855.1 Treponema putidum
Treponema (genus) 2
GCF_024401005.1 Treponema putidum
Treponema (genus) 2
GCF_024401155.1 Treponema putidum
Treponema (genus) 2
GCF_017161305.1 Treponema ruminis
Treponema (genus) 1
GCF_036250655.1 Treponema saccharophilum
Treponema (genus) 1
GCF_024181585.1 Treponema socranskii subsp. buccale
Treponema (genus) 3
GCF_902983995.1 Treponema socranskii subsp. buccale
Treponema (genus) 3
GCF_024181665.1 Treponema sp. B152
Treponema (genus) 2
GCF_024181325.1 Treponema sp. OMZ 305
Treponema (genus) 2
GCF_024181225.1 Treponema sp. OMZ 787
Treponema (genus) 2
GCF_024181245.1 Treponema sp. OMZ 788
Treponema (genus) 2
GCF_024181265.1 Treponema sp. OMZ 789
Treponema (genus) 2
GCF_024181285.1 Treponema sp. OMZ 790
Treponema (genus) 2
GCF_024181305.1 Treponema sp. OMZ 791
Treponema (genus) 2
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.