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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_002356235.1 Photobacterium damselae subsp. piscicida
Photobacterium (genus) 15
GCF_002356195.1 Actinomyces sp. Chiba101
Actinomyces (genus) 3
GCF_002356175.1 Staphylococcus capitis
Staphylococcus (genus) 5
GCF_002356155.1 Microbacterium sp. TPU 3598
Microbacterium (genus) 2
GCF_002356115.1 Candidatus Nitrosoglobus terrae
Nitrosococcus (genus) 2
GCF_002356095.1 Pseudomonas putida
Pseudomonas (genus) 7
GCF_002356075.1 Mycoplasmopsis bovigenitalium
Mycoplasmopsis (genus) 2
GCF_002356055.1 Streptococcus intermedius
Streptococcus (genus) 4
GCF_002356035.1 Nocardia seriolae
Nocardia (genus) 4
GCF_002356015.1 Mycobacterium tuberculosis
Mycobacterium (genus) 1
GCF_002355975.1 Lysobacter enzymogenes
Lysobacter (genus) 2
GCF_002355955.1 Candidatus Desulfovibrio trichonymphae
Desulfovibrio (genus) 2
GCF_002355895.1 Streptococcus sp. NPS 308
Streptococcus (genus) 4
GCF_002355875.1 Pseudomonas chlororaphis subsp. aurantiaca
Pseudomonas (genus) 5
GCF_002355855.1 Sphingobium cloacae
Sphingobium (genus) 2
GCF_002355835.1 Candidatus Endomicrobiellum trichonymphae
Endomicrobium (genus) 1
GCF_002355815.1 Streptococcus pyogenes
Streptococcus (genus) 5
GCF_002355795.1 Clostridium perfringens
Clostridium sensu stricto (genus) 10
GCF_002355775.1 Mycobacterium ulcerans subsp. shinshuense
Mycobacterium (genus) 1
GCF_002355755.1 Enterococcus faecalis
Enterococcus (genus) 4
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.