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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_019904295.1 Ruegeria sp. SCSIO 43209
Ruegeria (genus) 3
GCF_009363615.1 Ruegeria sp. THAF33
Ruegeria (genus) 3
GCF_000014065.1 Ruegeria sp. TM1040
Epibacterium (genus) 5
GCF_024628725.1 Ruegeria sp. YS9
Ruegeria (genus) 3
GCF_001078055.1 Rufibacter radiotolerans
Rufibacter (genus) 2
GCF_001577755.1 Rufibacter sp. DG15C
Nibribacter (genus) 3
GCF_001310085.1 Rufibacter tibetensis
Rufibacter (genus) 4
GCF_019603315.1 Ruficoccus sp. ZRK36
Ruficoccus (genus) 1
GCF_029834475.1 Rugamonas sp. DEMB1
Rugamonas (genus) 10
GCF_000934545.1 Rugosibacter aromaticivorans
Rugosibacter (genus) 2
GCF_040536845.1 Ruicaihuangia caeni
Microbacteriaceae (family) 2
GCF_000022065.1 Ruminiclostridium cellulolyticum H10
Ruminiclostridium (genus) 8
GCF_005473905.2 Ruminiclostridium herbifermentans
Ruminiclostridium (genus) 5
GCF_029318685.1 Ruminiclostridium papyrosolvens DSM 2782
Ruminiclostridium (genus) 8
GCF_000179635.2 Ruminococcus albus 7 = DSM 20455
Ruminococcus (genus) 4
GCF_000723465.1 Ruminococcus bicirculans (ex Wegman et al. 2014)
Hominimerdicola (genus) 4
GCF_005601135.1 Ruminococcus bovis
Ruminococcus (genus) 4
GCF_025151995.1 Ruminococcus gauvreauii
Lachnospiraceae (family) 5
GCF_046603875.1 Ruminococcus gauvreauii
Lachnospiraceae (family) 5
GCF_025152405.1 [Ruminococcus] lactaris ATCC 29176
Mediterraneibacter (genus) 5
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.