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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_038368245.1 Shigella sonnei
Escherichia/Shigella (genus) 7
GCF_046271975.1 Shigella sonnei
Escherichia/Shigella (genus) 7
GCF_000283715.1 Shigella sonnei 53G
Escherichia/Shigella (genus) 7
GCF_000092525.1 Shigella sonnei Ss046
Escherichia/Shigella (genus) 7
GCF_047124445.1 Shimia sp. MIT1388
Shimia (genus) 4
GCF_047126315.1 Shimia sp. MIT910701
Shimia (genus) 4
GCF_900635135.1 Shimwellia blattae
Shimwellia (genus) 8
GCF_900636035.1 Shimwellia blattae
Shimwellia (genus) 8
GCF_000262305.1 Shimwellia blattae DSM 4481 = NBRC 105725
Shimwellia (genus) 8
GCF_023038235.1 Shinella oryzae
Shinella (genus) 3
GCF_030733885.1 Shinella oryzae
Shinella (genus) 3
GCF_022637395.1 Shinella sp. H4-D48
Shinella (genus) 3
GCF_001652565.1 Shinella sp. HZN7
Shinella (genus) 3
GCF_016839145.1 Shinella sp. PSBB067
Shinella (genus) 3
GCF_945994535.1 Shinella sp. WSC3-e
Shinella (genus) 3
GCF_963942435.1 Shinella sp. WSD5-1
Shinella (genus) 3
GCF_030733865.1 Shinella sumterensis
Shinella (genus) 3
GCF_020883495.1 Shinella zoogloeoides
Shinella (genus) 3
GCF_022682305.1 Shinella zoogloeoides
Shinella (genus) 3
GCF_030733845.1 Shinella zoogloeoides
Shinella (genus) 3
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.