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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_000007145.1 Xanthomonas campestris pv. campestris str. ATCC 33913
Xanthomonas (genus) 2
GCF_000007125.1 Brucella melitensis bv. 1 str. 16M
Brucella (genus) 3
GCF_000007105.1 Zymomonas mobilis subsp. mobilis ZM4 = ATCC 31821
Zymomonas (genus) 3
GCF_000007085.1 Caldanaerobacter subterraneus subsp. tengcongensis MB4
Caldanaerobacter (genus) 4
GCF_000007065.1 Methanosarcina mazei Go1
Methanosarcina (genus) 3
GCF_000007045.1 Streptococcus pneumoniae R6
Streptococcus (genus) 4
GCF_000007025.1 Rickettsia conorii str. Malish 7
Rickettsia (genus) 1
GCF_000007005.1 Saccharolobus solfataricus P2
Saccharolobus (genus) 1
GCF_000006985.1 Chlorobaculum tepidum TLS
Chlorobaculum (genus) 2
GCF_000006965.1 Sinorhizobium meliloti 1021
Ensifer (genus) 3
GCF_000006945.2 Salmonella enterica subsp. enterica serovar Typhimurium str. LT2
Salmonella (genus) 7
GCF_000006925.2 Shigella flexneri 2a str. 301
Escherichia/Shigella (genus) 7
GCF_000006905.1 Caulobacter vibrioides CB15
Caulobacter (genus) 2
GCF_000006885.1 Streptococcus pneumoniae TIGR4
Streptococcus (genus) 4
GCF_000006865.1 Lactococcus lactis subsp. lactis Il1403
Lactococcus (genus) 6
GCF_000006845.1 Neisseria gonorrhoeae FA 1090
Neisseria (genus) 4
GCF_000006825.1 Pasteurella multocida subsp. multocida str. Pm70
Pasteurella (genus) 6
GCF_000006805.1 Halobacterium salinarum NRC-1
Halobacterium (genus) 1
GCF_000006785.2 Streptococcus pyogenes M1 GAS
Streptococcus (genus) 6
GCF_000006765.1 Pseudomonas aeruginosa PAO1
Pseudomonas (genus) 4
GCF_000006745.1 Vibrio cholerae O1 biovar El Tor str. N16961
Vibrio (genus) 8
GCF_000006725.1 Xylella fastidiosa 9a5c
Xylella (genus) 2
GCF_000006685.1 Chlamydia muridarum str. Nigg
Chlamydia (genus) 2
GCF_000006645.1 Yersinia pestis KIM10+
Yersinia (genus) 7
GCF_000006625.1 Ureaplasma parvum serovar 3 str. ATCC 700970
Ureaplasma (genus) 2
GCF_000006605.1 Corynebacterium jeikeium K411
Corynebacterium (genus) 3
GCF_000005845.2 Escherichia coli str. K-12 substr. MG1655
Escherichia/Shigella (genus) 7
GCF_000005825.2 Alkalihalophilus pseudofirmus OF4
Alkalihalophilus (genus) 7
GCA_965217455.1 Nitratireductor aquimarinus
Nitratireductor (genus) 2
GCA_964273555.1 Spiroplasma endosymbiont of Harpalus anxius
Spiroplasma (genus) 2
GCA_964263215.1 Spiroplasma endosymbiont of Rhagonycha fulva
Spiroplasma (genus) 1
GCA_964031255.1 Candidatus Tremblaya endosymbiont of Pseudococcus viburni
Burkholderiales (order) 2
GCA_964031215.1 Candidatus Karelsulcia muelleri
Bacteroidota (phylum) 1
GCA_964031205.1 Spiroplasma endosymbiont of Stenodema calcarata
Spiroplasma (genus) 1
GCA_964031185.1 Wolbachia endosymbiont (group A) of Cerceris ruficornis
Anaplasma (genus) 1
GCA_964031175.1 Spiroplasma endosymbiont of Melieria omissa
Spiroplasma (genus) 2
GCA_964031145.1 Candidatus Tremblaya endosymbiont of Balanococcus diminutus
Burkholderiales (order) 2
GCA_964031135.1 Spiroplasma endosymbiont of Aleiodes alternator
Spiroplasma (genus) 2
GCA_964031125.1 Wolbachia endosymbiont (group A) of Melieria omissa
Anaplasmataceae (family) 1
GCA_964031095.1 Candidatus Tisiphia endosymbiont of Mystacides longicornis
Rickettsia (genus) 1
GCA_964031055.1 Wolbachia endosymbiont (group A) of Schoenobius gigantella
Rickettsiales (order) 1
GCA_964031025.1 Wolbachia endosymbiont (group A) of Microdon myrmicae
Anaplasmataceae (family) 1
GCA_964031015.1 Candidatus Tremblaya endosymbiont of Planococcus citri
Burkholderiales (order) 2
GCA_964031005.1 Wolbachia endosymbiont (group B) of Schoenobius gigantella
Anaplasmataceae (family) 1
GCA_964030995.1 Spiroplasma endosymbiont of Tenthredo amoena
Spiroplasma (genus) 1
GCA_964030915.1 Wolbachia endosymbiont (group B) of Eupithecia inturbata
Rickettsiales (order) 1
GCA_964030905.1 Wolbachia endosymbiont (group A) of Sturmia bella
Anaplasmataceae (family) 1
GCA_964030885.1 Wolbachia endosymbiont (group A) of Barypeithes pellucidus
Anaplasmataceae (family) 1
GCA_964030825.1 Spiroplasma endosymbiont of Polydrusus pterygomalis
Spiroplasma (genus) 2
GCA_964030735.1 Candidatus Tisiphia endosymbiont of Ceraclea dissimilis
Rickettsia (genus) 1
GCA_964030705.1 Wolbachia endosymbiont (group B) of Anania hortulata
Rickettsiales (order) 1
GCA_964030695.1 Candidatus Tisiphia endosymbiont of Stenodema calcarata
Rickettsia (genus) 1
GCA_964030675.1 Wolbachia endosymbiont (group A) of Scoparia ambigualis
Anaplasmataceae (family) 1
GCA_964030665.1 Candidatus Tisiphia endosymbiont of Mystacides longicornis
Rickettsia (genus) 1
GCA_964030635.1 Spiroplasma endosymbiont of Polydrusus pterygomalis
Spiroplasma (genus) 1
GCA_964019825.1 Spiroplasma endosymbiont of Lasioglossum calceatum
Spiroplasma (genus) 1
GCA_964019725.1 Spiroplasma endosymbiont of Antitype chi
Spiroplasma (genus) 1
GCA_902809825.1 Candidatus Hydrogenisulfobacillus filiaventi
Sulfobacillus (genus) 4
GCA_048814845.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCA_048814835.1 Escherichia coli HB101
Escherichia/Shigella (genus) 7
GCA_048814825.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCA_048814815.1 Pasteurella multocida
Pasteurella (genus) 6
GCA_048814775.1 Haemophilus influenzae
Haemophilus (genus) 6
GCA_048814765.1 Haemophilus influenzae
Haemophilus (genus) 6
GCA_048537635.1 Wolbachia endosymbiont of Rhagoletis indifferens
Pseudomonas (genus) 1
GCA_048288285.1 Arthrobacter sp. N1
Arthrobacter (genus) 4
GCA_047159365.1 Candidatus Carsonella ruddii (Anomoneura mori)
Candidatus Carsonella (genus) 1
GCA_046764185.2 Klebsiella pneumoniae
Klebsiella (genus) 8
GCA_045343845.1 Candidatus Profftella armatura
Oxalobacteraceae (family) 1
GCA_042140085.1 Nitratireductor sp. ac15
Nitratireductor (genus) 2
GCA_039623705.1 Sulfobacillus thermotolerans
Sulfobacillus (genus) 4
GCA_038446195.1 Erysipelothrix sp. D19-032
Erysipelothrix (genus) 6
GCA_038095545.1 Macrococcus psychrotolerans
Macrococcus (genus) 5
GCA_038095535.1 Macrococcus psychrotolerans
Macrococcus (genus) 5
GCA_038020335.1 Salmonella enterica subsp. enterica serovar Infantis
Salmonella (genus) 7
GCA_038020165.1 Salmonella enterica subsp. enterica serovar Infantis
Salmonella (genus) 7
GCA_038020145.1 Salmonella enterica subsp. enterica serovar Infantis
Salmonella (genus) 7
GCA_038019735.1 Salmonella enterica subsp. enterica serovar Infantis
Salmonella (genus) 7
GCA_032834875.1 Sulfuracidifex metallicus DSM 6482 = JCM 9184
Sulfuracidifex (genus) 1
GCA_028752135.1 Ehrlichia sp. JZT12
Enterobacteriaceae (family) 1
GCA_027945135.1 Candidatus Phytoplasma oryzae
Mariniplasma (genus) 2
GCA_027594465.1 Candidatus Phytoplasma sacchari
Acholeplasmataceae (family) 2
GCA_026153535.1 Sphingobacterium sp. KU25419
Sphingobacterium (genus) 6
GCA_025839675.1 Candidatus Lokiarchaeum ossiferum
Archaea (domain) 3
GCA_025340205.1 Ignicoccus pacificus DSM 13166
Ignicoccus (genus) 1
GCA_020544305.1 Staphylococcus taiwanensis
Staphylococcus (genus) 4
GCA_020541285.1 Candidatus Gillettellia cooleyia
Enterobacterales (order) 1
GCA_018866225.1 Candidatus Minimicrobia naudis
Saccharibacteria_genera_incertae_sedis (genus) 1
GCA_015100165.3 Candidatus Phytoplasma asiaticum
Mariniplasma (genus) 2
GCA_014302835.1 Pedobacter sp. PAMC26386
Pedobacter (genus) 2
GCA_009936135.1 Candidatus Chazhemtobacterium aquaticus
Bacteria (domain) 1
GCA_004295685.1 Fluviispira sanaruensis
Fluviispira (genus) 5
GCA_001956655.2 Staphylococcus epidermidis
Staphylococcus (genus) 6
GCA_001747005.2 Cyanobacterium sp. IPPAS B-1200
Cyanobacterium (genus) 3
GCA_001077535.2 Clostridioides difficile ATCC 9689 = DSM 1296
Clostridioides (genus) 12
GCA_000826925.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_000826905.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_000474035.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_000186985.3 Mycoplasma haemofelis Ohio2
Haemobartonella (genus) 1
GCA_000146265.4 Aggregatibacter actinomycetemcomitans D11S-1
Aggregatibacter (genus) 6
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.