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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_000772775.3 Xanthomonas vasicola
Xanthomonas (genus) 2
GCF_000775995.1 Treponema sp. OMZ 838
Treponema (genus) 2
GCF_000785495.1 Pimelobacter simplex
Nocardioides (genus) 2
GCF_000800785.1 Mycoplasma mycoides subsp. mycoides
Mycoplasma (genus) 2
GCF_000801315.1 Hymenobacter sp. DG25B
Hymenobacter (genus) 2
GCF_000807315.1 Bradyrhizobium japonicum
Bradyrhizobium (genus) 2
GCF_000814825.1 Berryella intestinalis
Berryella (genus) 2
GCF_000815185.1 Xanthomonas sacchari
Xanthomonas (genus) 2
GCF_000816885.1 Xanthomonas citri subsp. citri A306
Xanthomonas (genus) 2
GCF_000817325.1 Synechococcus elongatus UTEX 2973
Synechococcus (genus) 2
GCF_000819565.1 Celeribacter indicus
Celeribacter (genus) 2
GCF_000826985.1 Helicobacter pylori 26695-1
Helicobacter (genus) 2
GCF_000827025.1 Helicobacter pylori
Helicobacter (genus) 2
GCF_000828535.1 Methanococcus maripaludis KA1
Methanococcus (genus) 2
GCF_000828555.1 Methanococcus maripaludis OS7
Methanococcus (genus) 2
GCF_000828575.1 Methanothermobacter sp. CaT2
Methanothermobacter (genus) 2
GCF_000828635.1 Sulfuritalea hydrogenivorans sk43H
Sulfuritalea (genus) 2
GCF_000828715.1 Winogradskyella sp. PG-2
Winogradskyella (genus) 2
GCF_000828735.1 Ureaplasma parvum serovar 3
Ureaplasma (genus) 2
GCF_000828855.1 Metamycoplasma canadense
Metamycoplasma (genus) 2
GCF_000828895.1 Serpentinimonas raichei
Serpentinimonas (genus) 2
GCF_000828915.1 Serpentinimonas maccroryi
Serpentinimonas (genus) 2
GCF_000828955.1 Helicobacter pylori NY40
Helicobacter (genus) 2
GCF_000829095.1 Helicobacter pylori 26695-1
Helicobacter (genus) 2
GCF_000829115.1 Helicobacter pylori 26695-1CL
Helicobacter (genus) 2
GCF_000829135.1 Helicobacter pylori 26695-1CH
Helicobacter (genus) 2
GCF_000829235.1 cyanobacterium endosymbiont of Epithemia turgida isolate EtSB Lake Yunoko
Chroococcales (order) 2
GCF_000829335.1 Mycoplasmopsis californica HAZ160_1
Mycoplasmopsis (genus) 2
GCF_000830945.1 Chlamydia muridarum str. Nigg3 CMUT3-5
Chlamydia (genus) 2
GCF_000830965.1 Chlamydia muridarum str. Nigg CM972
Chlamydia (genus) 2
GCF_000833475.1 Francisella tularensis subsp. tularensis
Francisella (genus) 2
GCF_000835085.1 Mycoplasma capricolum subsp. capripneumoniae 87001
Mycoplasma (genus) 2
GCF_000875675.1 Rathayibacter toxicus
Rathayibacter (genus) 2
GCF_000875755.1 Mycoplasma yeatsii GM274B
Mycoplasma (genus) 2
GCF_000934545.1 Rugosibacter aromaticivorans
Rugosibacter (genus) 2
GCF_000940825.1 Xanthomonas oryzae pv. oryzicola
Xanthomonas (genus) 2
GCF_000940845.1 Propionibacterium freudenreichii subsp. freudenreichii
Propionibacterium (genus) 2
GCF_000941035.1 Leptospira interrogans serovar Linhai str. 56609
Leptospira (genus) 2
GCF_000948075.1 Xanthomonas oryzae pv. oryzae PXO86
Xanthomonas (genus) 2
GCF_000950575.1 Psychromicrobium lacuslunae
Psychromicrobium (genus) 2
GCF_000952915.1 Mycoplasma capricolum subsp. capripneumoniae
Mycoplasma (genus) 2
GCF_000953015.1 Candidatus Methylopumilus turicensis
Methylotenera (genus) 2
GCF_000953235.1 Mycoplasma capricolum subsp. capripneumoniae
Mycoplasma (genus) 2
GCF_000953375.1 Mycoplasma capricolum subsp. capripneumoniae
Mycoplasma (genus) 2
GCF_000954135.1 Ralstonia mannitolilytica
Ralstonia (genus) 2
GCF_000958465.1 Clavibacter michiganensis subsp. insidiosus
Clavibacter (genus) 2
GCF_000961155.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961175.1 Xanthomonas citri subsp. citri UI6
Xanthomonas (genus) 2
GCF_000961195.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961215.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961235.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961255.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961275.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961295.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961315.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961335.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961355.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961375.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961395.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961415.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961435.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961455.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961475.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000961495.1 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_000963865.1 Flagellimonas lutaonensis
Muricauda (genus) 2
GCF_000968055.1 Alteracholeplasma palmae J233
Acholeplasma (genus) 2
GCF_000968135.1 Magnetospira sp. QH-2
Magnetospira (genus) 2
GCF_000969685.2 Xanthomonas citri pv. fuscans
Xanthomonas (genus) 2
GCF_000969765.1 Mycoplasmopsis synoviae ATCC 25204
Mycoplasmopsis (genus) 2
GCF_000970665.2 Streptococcus gordonii
Streptococcus (genus) 2
GCF_000971705.1 Chlamydia trachomatis
Chlamydia (genus) 2
GCF_000971725.1 Chlamydia trachomatis
Chlamydia (genus) 2
GCF_000972745.1 Xanthomonas arboricola
Xanthomonas (genus) 2
GCF_000973105.1 Zobellia galactanivorans
Zobellia (genus) 2
GCF_000981765.1 Kangiella geojedonensis
Kangiella (genus) 2
GCF_000981785.2 Microcystis aeruginosa NIES-2549
Microcystis (genus) 2
GCF_000982695.1 Helicobacter pylori J99
Helicobacter (genus) 2
GCF_000988385.1 Escherichia coli
Escherichia/Shigella (genus) 2
GCF_001007875.1 Sedimenticola thiotaurini
Sedimenticola (genus) 2
GCF_001008165.2 Croceibacterium atlanticum
Croceibacterium (genus) 2
GCF_001010025.2 Xanthomonas perforans
Xanthomonas (genus) 2
GCF_001010765.1 Leptospira interrogans serovar Bratislava
Leptospira (genus) 2
GCF_001010805.1 Spongiibacter sp. IMCC21906
Spongiibacter (genus) 2
GCF_001017595.1 Metamycoplasma hominis
Metamycoplasma (genus) 2
GCF_001017775.3 Pandoraea thiooxydans
Pandoraea (genus) 2
GCF_001021385.1 Mycobacterium sp. EPa45
Mycobacterium (genus) 2
GCF_001021935.1 Xanthomonas translucens pv. undulosa
Xanthomonas (genus) 2
GCF_001025135.1 Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456
Bifidobacterium (genus) 2
GCF_001025175.1 Bifidobacterium breve DSM 20213 = JCM 1192
Bifidobacterium (genus) 2
GCF_001027025.1 Kosmotoga pacifica
Kosmotoga (genus) 2
GCF_001028285.3 Xanthomonas citri pv. citri
Xanthomonas (genus) 2
GCF_001042655.1 Gardnerella vaginalis ATCC 14018 = JCM 11026
Gardnerella (genus) 2
GCF_001042675.1 Parascardovia denticolens DSM 10105 = JCM 12538
Parascardovia (genus) 2
GCF_001042695.1 Scardovia inopinata JCM 12537
Scardovia (genus) 2
GCF_001042735.1 Xanthomonas oryzae pv. oryzicola
Xanthomonas (genus) 2
GCF_001042745.1 Xanthomonas oryzae pv. oryzicola
Xanthomonas (genus) 2
GCF_001042775.1 Xanthomonas oryzae pv. oryzicola
Xanthomonas (genus) 2
GCF_001042795.1 Xanthomonas oryzae pv. oryzicola
Xanthomonas (genus) 2
GCF_001042815.1 Xanthomonas oryzae pv. oryzicola
Xanthomonas (genus) 2
GCF_001042835.1 Xanthomonas oryzae pv. oryzicola
Xanthomonas (genus) 2
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.