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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_000392535.3 Helicobacter pylori UM066
Helicobacter (genus) 2
GCF_000397185.1 Strawberry lethal yellows phytoplasma (CPA) str. NZSb11
Acholeplasmataceae (family) 2
GCF_000401735.2 Xanthomonas campestris pv. campestris str. CN14
Xanthomonas (genus) 2
GCF_000403575.2 Xanthomonas campestris pv. campestris str. CN15
Xanthomonas (genus) 2
GCF_000439295.2 Helicobacter pylori UM298
Helicobacter (genus) 2
GCF_000441585.1 Chlamydia trachomatis RC-F/69
Chlamydia (genus) 2
GCF_000441615.1 Chlamydia trachomatis RC-L2(s)/46
Chlamydia (genus) 2
GCF_000441655.1 Chlamydia trachomatis RC-J/943
Chlamydia (genus) 2
GCF_000441675.1 Chlamydia trachomatis RC-J/953
Chlamydia (genus) 2
GCF_000441695.1 Chlamydia trachomatis RC-L2(s)/3
Chlamydia (genus) 2
GCF_000441735.1 Chlamydia trachomatis RC-J(s)/122
Chlamydia (genus) 2
GCF_000441755.1 Chlamydia trachomatis RC-J/966
Chlamydia (genus) 2
GCF_000441795.1 Chlamydia trachomatis RC-J/971
Chlamydia (genus) 2
GCF_000441815.1 Chlamydia trachomatis RC-L2/55
Chlamydia (genus) 2
GCF_000447675.1 Treponema pedis str. T A4
Treponema (genus) 2
GCF_000463015.1 Variovorax paradoxus B4
Variovorax (genus) 2
GCF_000477435.1 Candidatus Symbiobacter mobilis CR
Comamonadaceae (family) 2
GCF_000478825.2 Synechocystis sp. PCC 6714
Cyanophyceae (class) 2
GCF_000478885.1 Adlercreutzia equolifaciens DSM 19450
Adlercreutzia (genus) 2
GCF_000479315.1 Streptococcus ilei
Streptococcus (genus) 2
GCF_000479335.1 Streptococcus ilei
Streptococcus (genus) 2
GCF_000479355.1 Mesoplasma florum W37
Mesoplasma (genus) 2
GCF_000498315.1 Helicobacter pylori BM012A
Helicobacter (genus) 2
GCF_000498335.1 Helicobacter pylori BM012S
Helicobacter (genus) 2
GCF_000498655.1 Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023
Zymomonas (genus) 2
GCF_000507225.1 Chlamydia trachomatis C/TW-3
Chlamydia (genus) 2
GCF_000507245.1 Salinispira pacifica
Salinispira (genus) 2
GCF_000508245.1 Mycoplasma ovis str. Michigan
Haemobartonella (genus) 2
GCF_000513295.1 Magnetospirillum gryphiswaldense MSR-1 v2
Magnetospirillum (genus) 2
GCF_000517625.1 Halostagnicola larsenii XH-48
Halostagnicola (genus) 2
GCF_000521505.1 Advenella mimigardefordensis DPN7
Advenella (genus) 2
GCF_000522985.1 Gemmatirosa kalamazoonensis
Gemmatirosa (genus) 2
GCF_000565215.1 Spiroplasma sabaudiense Ar-1343
Spiroplasma (genus) 2
GCF_000568815.1 Sulfurospirillum multivorans DSM 12446
Sulfurospirillum (genus) 2
GCF_000568955.2 Bifidobacterium breve 12L
Bifidobacterium (genus) 2
GCF_000568975.1 Bifidobacterium breve JCM 7017
Bifidobacterium (genus) 2
GCF_000569015.1 Bifidobacterium breve JCM 7019
Bifidobacterium (genus) 2
GCF_000569035.1 Bifidobacterium breve NCFB 2258
Bifidobacterium (genus) 2
GCF_000569055.1 Bifidobacterium breve 689b
Bifidobacterium (genus) 2
GCF_000590575.1 Chlamydia trachomatis
Chlamydia (genus) 2
GCF_000590615.1 Chlamydia trachomatis
Chlamydia (genus) 2
GCF_000590635.1 Chlamydia trachomatis F/11-96
Chlamydia (genus) 2
GCF_000590675.1 Chlamydia trachomatis
Chlamydia (genus) 2
GCF_000590755.1 Chlamydia trachomatis
Chlamydia (genus) 2
GCF_000590925.1 Roseicyclus elongatus DSM 19469
Roseibacterium (genus) 2
GCF_000600045.1 Helicobacter pylori oki102
Helicobacter (genus) 2
GCF_000600085.1 Helicobacter pylori oki112
Helicobacter (genus) 2
GCF_000600125.1 Helicobacter pylori oki128
Helicobacter (genus) 2
GCF_000600145.1 Helicobacter pylori oki154
Helicobacter (genus) 2
GCF_000600165.1 Helicobacter pylori oki422
Helicobacter (genus) 2
GCF_000600185.1 Helicobacter pylori oki673
Helicobacter (genus) 2
GCF_000600205.1 Helicobacter pylori oki828
Helicobacter (genus) 2
GCF_000600225.1 Helicobacter pylori oki898
Helicobacter (genus) 2
GCF_000604125.1 Treponema pallidum subsp. pallidum str. Sea 81-4
Treponemataceae (family) 2
GCF_000612055.1 Trueperella pyogenes
Trueperella (genus) 2
GCF_000612685.1 Castellaniella defragrans 65Phen
Castellaniella (genus) 2
GCF_000612765.1 Bartonella henselae
Bartonella (genus) 2
GCF_000612965.1 Bartonella henselae
Bartonella (genus) 2
GCF_000635915.2 Brevundimonas naejangsanensis
Brevundimonas (genus) 2
GCF_000648235.2 Neochlamydia sp. S13
Neochlamydia (genus) 2
GCF_000685625.1 Helicobacter pylori J166
Helicobacter (genus) 2
GCF_000685665.1 Helicobacter pylori
Helicobacter (genus) 2
GCF_000685705.1 Helicobacter pylori
Helicobacter (genus) 2
GCF_000685745.1 Helicobacter pylori
Helicobacter (genus) 2
GCF_000689355.1 Bartonella tribocorum
Bartonella (genus) 2
GCF_000695095.2 Gemmatimonas phototrophica
Gemmatimonas (genus) 2
GCF_000695835.1 Mycoplasmopsis californica
Mycoplasmopsis (genus) 2
GCF_000695895.1 Bifidobacterium animalis
Bifidobacterium (genus) 2
GCF_000695975.1 Leptospirillum ferriphilum YSK
Leptospirillum (genus) 2
GCF_000698805.1 Xylella fastidiosa subsp. sandyi Ann-1
Xylella (genus) 2
GCF_000698825.1 Xylella fastidiosa MUL0034
Xylella (genus) 2
GCF_000709455.1 Chlamydia muridarum str. Nigg 2 MCR
Chlamydia (genus) 2
GCF_000723425.2 Mycobacterium marinum E11
Mycobacterium (genus) 2
GCF_000723725.2 Xanthomonas citri pv. viticola
Xanthomonas (genus) 2
GCF_000724625.1 Fimbriimonas ginsengisoli Gsoil 348
Fimbriimonas (genus) 2
GCF_000725385.1 Dyella japonica A8
Dyella (genus) 2
GCF_000725425.1 Palaeococcus pacificus DY20341
Palaeococcus (genus) 2
GCF_000737325.1 Sandaracinus amylolyticus
Sandaracinus (genus) 2
GCF_000737575.1 Synechococcus sp. KORDI-49
Synechococcus (genus) 2
GCF_000738435.1 Planktomarina temperata RCA23
Planktomarina (genus) 2
GCF_000739065.1 Methanocaldococcus bathoardescens
Methanocaldococcus (genus) 2
GCF_000742835.1 Candidatus Odyssella acanthamoebae
Alphaproteobacteria (class) 2
GCF_000754265.1 Candidatus Palibaumannia cicadellinicola
Pectobacteriaceae (family) 2
GCF_000755085.1 Brucella suis
Brucella (genus) 2
GCF_000755105.1 Brucella suis
Brucella (genus) 2
GCF_000755145.1 Treponema putidum
Treponema (genus) 2
GCF_000756715.1 Jeotgalicoccus saudimassiliensis
Jeotgalicoccus (genus) 2
GCF_000759375.2 Metamycoplasma hominis
Metamycoplasma (genus) 2
GCF_000762265.1 Methanobacterium formicicum
Methanobacterium (genus) 2
GCF_000764535.1 Sphingomonas taxi
Sphingomonas (genus) 2
GCF_000767275.3 Fervidobacterium islandicum
Fervidobacterium (genus) 2
GCF_000767405.1 Chlamydia muridarum
Chlamydia (genus) 2
GCF_000767445.1 Chlamydia muridarum
Chlamydia (genus) 2
GCF_000767605.1 Mycolicibacterium smegmatis MC2 155
Mycobacterium (genus) 2
GCF_000767665.1 Mycolicibacterium smegmatis
Mycobacterium (genus) 2
GCF_000767705.1 Mycolicibacterium smegmatis
Mycobacterium (genus) 2
GCF_000767725.1 Metamycoplasma hominis ATCC 27545
Metamycoplasma (genus) 2
GCF_000770355.2 Xanthomonas vasicola pv. arecae
Xanthomonas (genus) 2
GCF_000772145.1 Chlamydia muridarum
Chlamydia (genus) 2
GCF_000772715.2 Xanthomonas vasicola
Xanthomonas (genus) 2
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.