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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_002442795.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002442775.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002442735.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002442715.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002442695.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002442675.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002442635.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002442615.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002442535.1 Shigella sonnei
Escherichia/Shigella (genus) 7
GCF_002442515.1 Brochothrix thermosphacta
Brochothrix (genus) 9
GCF_002442495.2 Yersinia ruckeri
Yersinia (genus) 7
GCF_002441975.1 Paracidovorax citrulli
Acidovorax (genus) 3
GCF_002441955.1 Methylomonas koyamae
Methylomonas (genus) 3
GCF_002441935.1 Mesoplasma lactucae ATCC 49193
Mesoplasma (genus) 3
GCF_002441855.2 Eubacterium maltosivorans
Eubacterium (genus) 5
GCF_002412045.1 Phaeobacter piscinae
Phaeobacter (genus) 4
GCF_002412025.1 Phaeobacter piscinae
Phaeobacter (genus) 4
GCF_002411865.3 Pseudomonas aeruginosa
Pseudomonas (genus) 4
GCF_002407525.2 Burkholderia cepacia
Burkholderia (genus) 6
GCF_002407505.1 Pseudoalteromonas sp. 1_2015MBL_MicDiv
Pseudoalteromonas (genus) 9
GCF_002407485.1 Zobellella denitrificans
Zobellella (genus) 8
GCF_002407265.1 Celeribacter ethanolicus
Celeribacter (genus) 3
GCF_002407245.1 Phaeobacter piscinae
Phaeobacter (genus) 4
GCF_002407205.1 Rhodobacter sp. CZR27
Cereibacter (genus) 4
GCF_002407185.1 Brachybacterium vulturis
Brachybacterium (genus) 3
GCF_002407165.1 Staphylococcus lugdunensis
Staphylococcus (genus) 6
GCF_002407145.1 Campylobacter coli
Campylobacter (genus) 3
GCF_002407125.1 Campylobacter jejuni
Campylobacter (genus) 3
GCF_002407085.1 Pseudoalteromonas marina
Pseudoalteromonas (genus) 8
GCF_002407065.1 Brachybacterium ginsengisoli
Brachybacterium (genus) 3
GCF_002393525.1 Phaeobacter gallaeciensis
Phaeobacter (genus) 4
GCF_002393505.1 Providencia alcalifaciens
Providencia (genus) 7
GCF_002393465.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002393445.1 Cedecea neteri
Cedecea (genus) 7
GCF_002393425.1 Burkholderia gladioli pv. gladioli
Burkholderia (genus) 5
GCF_002393405.1 Lelliottia amnigena
Enterobacteriaceae (family) 7
GCF_002393385.1 Pasteurella multocida
Pasteurella (genus) 6
GCF_002393365.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002393265.1 Enterococcus sp. FDAARGOS_375
Enterococcus (genus) 5
GCF_002393245.1 Citrobacter koseri
Citrobacter (genus) and Enterobacteriaceae (family) 7
GCF_002393225.1 Bacillus paralicheniformis
Bacillus (genus) 8
GCF_002386385.1 Citrobacter werkmanii
Citrobacter (genus) 8
GCF_002386365.1 Rothia mucilaginosa
Rothia (genus) 3
GCF_002386345.1 Streptococcus oralis
Streptococcus (genus) 4
GCF_002386325.1 Salmonella enterica subsp. enterica serovar Saintpaul
Salmonella (genus) 7
GCF_002386305.1 Morganella morganii
Morganella (genus) 7
GCF_002386285.1 Streptococcus gordonii
Streptococcus (genus) 4
GCF_002386265.1 Weissella paramesenteroides
Weissella (genus) 8
GCF_002386245.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCF_002386185.1 Staphylococcus simulans
Staphylococcus (genus) 6
GCF_002386165.1 Salmonella enterica subsp. enterica serovar Paratyphi A
Salmonella (genus) 7
GCF_002381385.1 Phaeobacter gallaeciensis
Phaeobacter (genus) 4
GCF_002381365.1 Phaeobacter gallaeciensis
Phaeobacter (genus) 4
GCF_002381325.1 Phaeobacter gallaeciensis
Phaeobacter (genus) 4
GCF_002381305.1 Phaeobacter gallaeciensis
Phaeobacter (genus) 4
GCF_002381285.1 Phaeobacter gallaeciensis
Phaeobacter (genus) 4
GCF_002381265.1 Brochothrix thermosphacta
Brochothrix (genus) 9
GCF_002379145.2 Wolbachia pipientis
Rickettsiales (order) 1
GCF_002374845.2 Wolbachia pipientis
Gammaproteobacteria (class) 1
GCF_002374815.1 Pseudoalteromonas atlantica
Pseudoalteromonas (genus) 8
GCF_002370525.2 Acinetobacter guillouiae
Acinetobacter (genus) 7
GCF_002370415.1 Leuconostoc mesenteroides
Leuconostoc (genus) 3
GCF_002370395.1 Leuconostoc suionicum
Leuconostoc (genus) 3
GCF_002370375.1 Latilactobacillus sakei
Latilactobacillus (genus) 5
GCF_002370355.1 Latilactobacillus sakei subsp. sakei DSM 20017 = JCM 1157
Latilactobacillus (genus) 5
GCF_002370195.2 Ureibacillus thermosphaericus
Ureibacillus (genus) 9
GCF_002370085.3 Leptospira interrogans
Leptospira (genus) 2
GCF_002369955.1 Ichthyobacterium seriolicida
Ichthyobacterium (genus) 1
GCF_002368395.1 Calothrix sp. NIES-3974
Calotrichaceae (family) 3
GCF_002357995.1 Streptococcus pneumoniae
Streptococcus (genus) 4
GCF_002357975.1 Mycobacterium tuberculosis
Mycobacterium (genus) 1
GCF_002357955.1 Mycobacterium tuberculosis
Mycobacterium (genus) 1
GCF_002357935.1 Mycobacterium tuberculosis
Mycobacterium (genus) 1
GCF_002357915.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002357895.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002357875.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002357295.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357275.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357255.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357235.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357215.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357195.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357175.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357155.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357135.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002357115.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002356695.1 Rickettsia japonica
Rickettsia (genus) 1
GCF_002356675.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCF_002356595.1 Helicobacter pylori
Helicobacter (genus) 2
GCF_002356575.1 Bacillus anthracis
Bacillus (genus) 11
GCF_002356555.2 Halorhodospira halochloris
Halorhodospira (genus) 2
GCF_002356535.2 Pseudomonas izuensis
Pseudomonas (genus) 7
GCF_002356415.1 Streptococcus oralis subsp. tigurinus
Streptococcus (genus) 4
GCF_002356375.1 Dehalococcoides mccartyi
Dehalococcoides (genus) 1
GCF_002356355.1 Thiohalobacter thiocyanaticus
Thiohalobacter (genus) 1
GCF_002356335.1 [Mycobacterium] stephanolepidis
Mycobacterium (genus) 1
GCF_002356315.1 Mycobacterium shigaense
Mycobacterium (genus) 1
GCF_002356295.1 Labilibaculum antarcticum
Labilibaculum (genus) 6
GCF_002356275.1 Burkholderia stabilis
Burkholderia (genus) 6
GCF_002356255.1 Mycobacterium tuberculosis
Mycobacterium (genus) 1
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.