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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_000215705.1 Ramlibacter tataouinensis TTB310
Ramlibacter (genus) 1
GCF_000215975.1 Thermodesulfobacterium geofontis OPF15
Thermodesulfobacteriaceae (family) 1
GCF_000215995.1 Pyrococcus yayanosii CH1
Pyrococcus (genus) 1
GCF_000217815.1 Pseudothermotoga thermarum DSM 5069
Pseudothermotoga (genus) 1
GCF_000218565.1 Afipia carboxidovorans OM5
Afipia (genus) 1
GCF_000218585.1 Afipia carboxidovorans OM4
Afipia (genus) 1
GCF_000219085.2 Mycobacterium avium subsp. paratuberculosis S397
Mycobacterium (genus) 1
GCF_000219175.1 Candidatus Moranella endobia PCIT
Sodalis (genus) 1
GCF_000219355.1 Candidatus Midichloria mitochondrii IricVA
Alphaproteobacteria (class) 1
GCF_000219375.1 Mycoplasmopsis bovis Hubei-1
Mycoplasmopsis (genus) 1
GCF_000219585.1 Nitrosomonas sp. Is79A3
Nitrosomonas (genus) 1
GCF_000221185.1 Thermococcus sp. 4557
Thermococcus (genus) 1
GCF_000221205.1 Rickettsia conorii subsp. heilongjiangensis 054
Rickettsia (genus) 1
GCF_000221985.1 Streptococcus pseudopneumoniae IS7493
Streptococcus (genus) 1
GCF_000222305.1 Borreliella bissettiae DN127
Borrelia (genus) 1
GCF_000223215.1 Brachyspira intermedia PWS/A
Brachyspira (genus) 1
GCF_000223395.1 Pyrolobus fumarii 1A
Pyrodictiaceae (family) 1
GCF_000224435.1 Mycobacterium tuberculosis CTRI-2
Mycobacterium (genus) 1
GCF_000224745.1 Rhodothermus marinus SG0.5JP17-172
Rhodothermus (genus) 1
GCF_000225445.1 Buchnera aphidicola str. Ak (Acyrthosiphon kondoi)
Buchnera (genus) 1
GCF_000225465.1 Buchnera aphidicola str. Ua (Uroleucon ambrosiae)
Buchnera (genus) 1
GCF_000226295.1 Chloracidobacterium thermophilum B
Chloracidobacterium (genus) 1
GCF_000226315.1 Micavibrio aeruginosavorus ARL-13
Alphaproteobacteria (class) 1
GCF_000227685.2 Thioalkalivibrio paradoxus ARh 1
Thioalkalivibrio (genus) 1
GCF_000230655.2 Thermotoga maritima MSB8
Thermotoga (genus) 1
GCF_000230975.2 Hyphomicrobium denitrificans 1NES1
Hyphomicrobium (genus) 1
GCF_000231015.2 Desulfurococcus amylolyticus DSM 16532
Desulfurococcus (genus) 1
GCF_000233435.1 Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR
Flavobacteriales (order) 1
GCF_000233915.3 Pseudoxanthomonas spadix BD-a59
Pseudoxanthomonas (genus) 1
GCF_000234725.1 Mycobacterium tuberculosis variant bovis BCG str. Mexico
Mycobacterium (genus) 1
GCF_000234805.1 Pyrobaculum ferrireducens
Thermoproteus (genus) 1
GCF_000235565.1 Methanothrix harundinacea 6Ac
Methanothrix (genus) 1
GCF_000236405.1 Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu
Flavobacteriales (order) 1
GCF_000237205.1 Simkania negevensis Z
Simkania (genus) 1
GCF_000237845.1 Rickettsia slovaca 13-B
Rickettsia (genus) 1
GCF_000238995.1 Mycoplasma haemocanis str. Illinois
Haemobartonella (genus) 1
GCF_000239475.1 Borreliella garinii BgVir
Borrelia (genus) 1
GCF_000241125.1 Mesomycoplasma hyorhinis GDL-1
Mesomycoplasma (genus) 1
GCF_000245095.1 Saccharolobus islandicus M.16.2
Saccharolobus (genus) 1
GCF_000245175.1 Saccharolobus islandicus M.16.23
Saccharolobus (genus) 1
GCF_000245215.1 Saccharolobus islandicus M.16.40
Saccharolobus (genus) 1
GCF_000245235.1 Saccharolobus islandicus M.16.43
Saccharolobus (genus) 1
GCF_000245275.1 Saccharolobus islandicus M.16.47
Saccharolobus (genus) 1
GCF_000246985.2 Thermococcus litoralis DSM 5473
Thermococcus (genus) 1
GCF_000252365.1 Rickettsia slovaca str. D-CWPP
Rickettsia (genus) 1
GCF_000253055.1 Thermoproteus tenax Kra 1
Thermoproteus (genus) 1
GCF_000253295.1 Hyphomicrobium sp. MC1
Hyphomicrobium (genus) 1
GCF_000253355.1 Mycobacterium tuberculosis variant africanum GM041182
Mycobacterium (genus) 1
GCF_000253375.1 Mycobacterium canettii CIPT 140010059
Mycobacterium (genus) 1
GCF_000258405.1 Ignavibacterium album JCM 16511
Ignavibacterium (genus) 1
GCF_000258425.1 Fervidicoccus fontis Kam940
Fervidicoccus (genus) 1
GCF_000262165.1 Mycobacterium sp. MOTT36Y
Mycobacterium (genus) 1
GCF_000262205.1 Francisella orientalis str. Toba 04
Francisella (genus) 1
GCF_000262715.1 Blattabacterium sp. (Blaberus giganteus)
Bacteroidota (phylum) 1
GCF_000263735.1 Pyrococcus sp. ST04
Pyrococcus (genus) 1
GCF_000263795.2 Hydrogenophaga sp. PBC
Hydrogenophaga (genus) 1
GCF_000264495.1 Thermogladius calderae 1633
Thermogladius (genus) 1
GCF_000265525.1 Thermococcus cleftensis
Thermococcus (genus) 1
GCF_000266945.1 Desulfomonile tiedjei DSM 6799
Desulfomonile (genus) 1
GCF_000270245.1 Microlunatus phosphovorus NM-1
Microlunatus (genus) 1
GCF_000270365.1 Mycobacterium tuberculosis CCDC5180
Mycobacterium (genus) 1
GCF_000270385.1 Chlamydia psittaci C19/98
Chlamydia (genus) 1
GCF_000270405.1 Chlamydia psittaci 01DC11
Chlamydia (genus) 1
GCF_000270425.1 Chlamydia psittaci 02DC15
Chlamydia (genus) 1
GCF_000270445.1 Chlamydia psittaci 08DC60
Chlamydia (genus) 1
GCF_000275605.1 Pyrococcus furiosus COM1
Pyrococcus (genus) 1
GCF_000276825.1 Mycobacterium paraintracellulare
Mycobacterium (genus) 1
GCF_000277125.1 Mycobacterium intracellulare ATCC 13950
Mycobacterium (genus) 1
GCF_000277145.1 Mycobacterium intracellulare MOTT-02
Mycobacterium (genus) 1
GCF_000277165.1 Rickettsia prowazekii str. Chernikova
Rickettsia (genus) 1
GCF_000277185.1 Rickettsia prowazekii str. Katsinyian
Rickettsia (genus) 1
GCF_000277205.1 Rickettsia prowazekii str. BuV67-CWPP
Rickettsia (genus) 1
GCF_000277245.1 Rickettsia prowazekii str. GvV257
Rickettsia (genus) 1
GCF_000277265.1 Rickettsia prowazekii str. RpGvF24
Rickettsia (genus) 1
GCF_000277285.1 Rickettsia typhi str. TH1527
Rickettsia (genus) 1
GCF_000277305.1 Rickettsia typhi str. B9991CWPP
Rickettsia (genus) 1
GCF_000277735.2 Mycobacterium tuberculosis H37Rv
Mycobacterium (genus) 1
GCF_000277775.2 Mycobacteroides abscessus subsp. massiliense str. GO 06
Mycobacterium (genus) 1
GCF_000277795.1 Mycoplasma wenyonii str. Massachusetts
Haemobartonella (genus) 1
GCF_000279145.1 Melioribacter roseus P3M-2
Melioribacter (genus) 1
GCF_000281235.1 Candidatus Mycoplasma haematolamae str. Purdue
Haemobartonella (genus) 1
GCF_000283595.1 Rickettsia japonica YH
Rickettsia (genus) 1
GCF_000283755.1 Mycoplasmoides pneumoniae 309
Mycoplasmoides (genus) 1
GCF_000283775.1 Rickettsia rickettsii str. Colombia
Rickettsia (genus) 1
GCF_000283795.1 Rickettsia rickettsii str. Arizona
Rickettsia (genus) 1
GCF_000283815.1 Rickettsia rickettsii str. Hino
Rickettsia (genus) 1
GCF_000283915.1 Rickettsia canadensis str. CA410
Rickettsia (genus) 1
GCF_000283935.1 Rickettsia rickettsii str. Hlp#2
Rickettsia (genus) 1
GCF_000283955.1 Rickettsia rickettsii str. Brazil
Rickettsia (genus) 1
GCF_000283995.1 Rickettsia philipii str. 364D
Rickettsia (genus) 1
GCF_000284055.1 Rickettsia amblyommatis str. GAT-30V
Rickettsia (genus) 1
GCF_000284075.1 Rickettsia rhipicephali str. 3-7-female6-CWPP
Rickettsia (genus) 1
GCF_000284115.1 Phycisphaera mikurensis NBRC 102666
Phycisphaera (genus) 1
GCF_000284155.1 Rickettsia australis str. Cutlack
Rickettsia (genus) 1
GCF_000284175.1 Rickettsia montanensis str. OSU 85-930
Rickettsia (genus) 1
GCF_000284195.1 Rickettsia parkeri str. Portsmouth
Rickettsia (genus) 1
GCF_000284275.1 Bradyrhizobium cosmicum
Bradyrhizobium (genus) 1
GCF_000284335.1 Caldisericum exile AZM16c01
Caldisericum (genus) 1
GCF_000284415.1 Pararhodospirillum photometricum DSM 122
Pararhodospirillum (genus) 1
GCF_000287235.1 Candidatus Carsonella ruddii CE isolate Thao2000
Candidatus Carsonella (genus) 1
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.