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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_000013765.1 Shewanella denitrificans OS217
Shewanella (genus) 8
GCF_000013785.1 Stutzerimonas stutzeri A1501
Pseudomonas (genus) 4
GCF_000013805.1 Yersinia pestis Nepal516
Yersinia (genus) 7
GCF_000013825.1 Yersinia pestis Antiqua
Yersinia (genus) 7
GCF_000013865.1 Polaromonas sp. JS666
Polaromonas (genus) 1
GCF_000013885.1 Nitrobacter hamburgensis X14
Nitrobacter (genus) 1
GCF_000013905.1 Psychrobacter cryohalolentis K5
Psychrobacter (genus) 4
GCF_000013925.1 Mycobacterium ulcerans Agy99
Mycobacterium (genus) 1
GCF_000013945.1 Leptospira borgpetersenii serovar Hardjo-bovis str. L550
Leptospira (genus) 2
GCF_000013965.1 Leptospira borgpetersenii serovar Hardjo-bovis str. JB197
Leptospira (genus) 2
GCF_000013985.1 Sphingopyxis alaskensis RB2256
Sphingopyxis (genus) 1
GCF_000014005.1 Candidatus Koribacter versatilis Ellin345
Candidatus Koribacter (genus) 1
GCF_000014025.1 Aliarcobacter butzleri RM4018
Arcobacter (genus) 5
GCF_000014045.1 Roseobacter denitrificans OCh 114
Roseobacter (genus) 1
GCF_000014065.1 Ruegeria sp. TM1040
Epibacterium (genus) 5
GCF_000014105.1 Neisseria meningitidis 053442
Neisseria (genus) 4
GCF_000014125.1 Clostridium novyi NT
Clostridium sensu stricto (genus) 10
GCF_000014145.1 Cytophaga hutchinsonii ATCC 33406
Cytophaga (genus) 3
GCF_000014185.1 Rubrobacter xylanophilus DSM 9941
Rubrobacter (genus) 1
GCF_000014205.1 Streptococcus sanguinis SK36
Streptococcus (genus) 4
GCF_000014225.1 Paraglaciecola sp. T6c
Paraglaciecola (genus) 5
GCF_000014265.1 Trichodesmium erythraeum IMS101
Trichodesmium (genus) 2
GCF_000014285.2 Granulibacter bethesdensis CGDNIH1
Granulibacter (genus) 3
GCF_000014345.1 Rickettsia canadensis str. McKiel
Rickettsia (genus) 1
GCF_000014365.2 Streptococcus pneumoniae D39
Streptococcus (genus) 4
GCF_000014385.1 Oenococcus oeni PSU-1
Oenococcus (genus) 2
GCF_000014405.1 Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365
Lactobacillus (genus) 9
GCF_000014425.1 Lactobacillus gasseri ATCC 33323 = JCM 1131
Lactobacillus (genus) 6
GCF_000014445.1 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
Leuconostoc (genus) 4
GCF_000014465.1 Levilactobacillus brevis ATCC 367
Levilactobacillus (genus) 5
GCF_000014485.1 Streptococcus thermophilus LMD-9
Streptococcus (genus) 6
GCF_000014505.1 Pediococcus pentosaceus ATCC 25745
Pediococcus (genus) 5
GCF_000014525.1 Lacticaseibacillus paracasei ATCC 334
Lacticaseibacillus (genus) 5
GCF_000014545.1 Lactococcus cremoris subsp. cremoris SK11
Lactococcus (genus) 6
GCF_000014565.1 Rhodococcus jostii RHA1
Rhodococcus (genus) 4
GCF_000014585.1 Synechococcus sp. CC9311
Synechococcus (genus) 2
GCF_000014605.1 Francisella tularensis subsp. holarctica OSU18
Francisella (genus) 3
GCF_000014625.1 Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas (genus) 4
GCF_000014645.1 Francisella tularensis subsp. novicida U112
Francisella (genus) 3
GCF_000014685.1 Shewanella sp. MR-4
Shewanella (genus) 9
GCF_000014705.1 Shewanella frigidimarina NCIMB 400
Shewanella (genus) 9
GCF_000014725.1 Syntrophomonas wolfei subsp. wolfei str. Goettingen G311
Syntrophomonas (genus) 3
GCF_000014745.1 Maricaulis maris MCS10
Maricaulis (genus) 2
GCF_000014765.1 Nitrosomonas eutropha C91
Nitrosomonas (genus) 1
GCF_000014785.1 Alkalilimnicola ehrlichii MLHE-1
Alkalilimnicola (genus) 2
GCF_000014805.1 Aeromonas hydrophila subsp. hydrophila ATCC 7966
Aeromonas (genus) 10
GCF_000014845.1 Escherichia coli APEC O1
Escherichia/Shigella (genus) 7
GCF_000014865.1 Magnetococcus marinus MC-1
Magnetococcus (genus) 3
GCF_000014885.1 Shewanella piezotolerans WP3
Shewanella (genus) 8
GCF_000014925.1 Paenarthrobacter aurescens TC1
Paenarthrobacter (genus) 6
GCF_000014945.1 Methanothrix thermoacetophila PT
Methanothrix (genus) 2
GCF_000014965.1 Syntrophobacter fumaroxidans MPOB
Syntrophobacter (genus) 2
GCF_000014985.1 Mycobacterium avium 104
Mycobacterium (genus) 1
GCF_000015005.1 Mycolicibacterium smegmatis MC2 155
Mycobacterium (genus) 2
GCF_000015025.1 Acidothermus cellulolyticus 11B
Acidothermus (genus) 1
GCF_000015045.1 Pelobacter propionicus DSM 2379
Pelobacter (genus) 4
GCF_000015065.1 Bacillus thuringiensis str. Al Hakam
Bacillus (genus) 14
GCF_000015085.1 Campylobacter fetus subsp. fetus 82-40
Campylobacter (genus) 3
GCF_000015105.1 Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)
Gammaproteobacteria (class) 1
GCF_000015125.1 Chlorobium phaeobacteroides DSM 266
Chlorobium (genus) 2
GCF_000015145.1 Hyperthermus butylicus DSM 5456
Pyrodictium (genus) 1
GCF_000015165.1 Bradyrhizobium sp. BTAi1
Bradyrhizobium (genus) 2
GCF_000015185.1 Shewanella sp. W3-18-1
Shewanella (genus) 8
GCF_000015205.1 Pyrobaculum islandicum DSM 4184
Pyrobaculum (genus) 1
GCF_000015225.1 Thermofilum pendens Hrk 5
Thermofilum (genus) 1
GCF_000015245.1 Shewanella amazonensis SB2B
Shewanella (genus) 8
GCF_000015265.1 Nocardioides sp. JS614
Nocardioides (genus) 2
GCF_000015285.1 Psychromonas ingrahamii 37
Psychromonas (genus) 10
GCF_000015305.1 Mycolicibacterium vanbaalenii PYR-1
Mycobacterium (genus) 2
GCF_000015325.1 Paracidovorax citrulli AAC00-1
Acidovorax (genus) 3
GCF_000015345.1 Dichelobacter nodosus VCS1703A
Dichelobacter (genus) 3
GCF_000015365.1 Marinobacter nauticus VT8
Marinobacter (genus) 3
GCF_000015385.1 Lactobacillus helveticus DPC 4571
Lactobacillus (genus) 4
GCF_000015445.1 Bartonella bacilliformis KC583
Bartonella (genus) 2
GCF_000015465.1 Burkholderia mallei SAVP1
Burkholderia (genus) 5
GCF_000015485.1 Nitratidesulfovibrio vulgaris DP4
Desulfovibrio (genus) 5
GCF_000015505.1 Polaromonas naphthalenivorans CJ2
Polaromonas (genus) 2
GCF_000015525.1 Campylobacter jejuni subsp. jejuni 81-176
Campylobacter (genus) 3
GCF_000015565.1 Verminephrobacter eiseniae EF01-2
Verminephrobacter (genus) 3
GCF_000015585.1 Halorhodospira halophila SL1
Halorhodospira (genus) 2
GCF_000015605.1 Burkholderia mallei NCTC 10229
Burkholderia (genus) 4
GCF_000015625.1 Burkholderia mallei NCTC 10247
Burkholderia (genus) 4
GCF_000015645.1 Prochlorococcus marinus str. AS9601
Prochlorococcus (genus) 1
GCF_000015665.1 Prochlorococcus marinus str. MIT 9515
Prochlorococcus (genus) 1
GCF_000015685.1 Prochlorococcus marinus str. NATL1A
Prochlorococcus (genus) 1
GCF_000015705.1 Prochlorococcus marinus str. MIT 9303
Synechococcus (genus) 2
GCF_000015725.1 Methylibium petroleiphilum PM1
Methylibium (genus) 1
GCF_000015745.1 Geobacillus thermodenitrificans NG80-2
Geobacillus (genus) 10
GCF_000015765.1 Methanocorpusculum labreanum Z
Methanocorpusculum (genus) 3
GCF_000015785.2 Bacillus velezensis FZB42
Bacillus (genus) 9
GCF_000015805.1 Pyrobaculum calidifontis JCM 11548
Pyrobaculum (genus) 1
GCF_000015825.1 Methanoculleus marisnigri JR1
Methanoculleus (genus) 1
GCF_000015845.1 Shewanella baltica OS155
Shewanella (genus) 10
GCF_000015865.1 Acetivibrio thermocellus ATCC 27405
Acetivibrio (genus) 4
GCF_000015885.1 Actinobacillus pleuropneumoniae serovar 5b str. L20
Actinobacillus (genus) 6
GCF_000015905.1 Burkholderia pseudomallei 668
Burkholderia (genus) 4
GCF_000015925.1 Burkholderia pseudomallei 1106a
Burkholderia (genus) 4
GCF_000015945.1 Staphylothermus marinus F1
Staphylothermus (genus) 1
GCF_000015965.1 Prochlorococcus marinus str. MIT 9301
Prochlorococcus (genus) 1
GCF_000015985.1 Cereibacter sphaeroides ATCC 17029
Cereibacter (genus) 4
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.