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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_002310315.1 Bacillus velezensis
Bacillus (genus) 9
GCF_002310295.2 Caulobacter vibrioides
Caulobacter (genus) 2
GCF_002309555.1 Pseudomonas mosselii
Pseudomonas (genus) 7
GCF_002309535.1 Sulfurospirillum diekertiae
Sulfurospirillum (genus) 3
GCF_002307355.1 Pectobacterium polaris
Pectobacterium (genus) 7
GCF_002305895.1 Corallococcus macrosporus DSM 14697
Myxococcus (genus) 4
GCF_002305875.1 Cystobacter fuscus
Cystobacter (genus) 4
GCF_002305855.1 Melittangium boletus DSM 14713
Cystobacter (genus) 4
GCF_002304065.2 Mycobacterium avium subsp. hominissuis
Mycobacterium (genus) 1
GCF_002303275.1 Enterobacter cloacae
Enterobacter (genus) 8
GCF_002302655.1 Capnocytophaga canimorsus
Capnocytophaga (genus) 3
GCF_002302635.1 Capnocytophaga stomatis
Capnocytophaga (genus) 3
GCF_002302615.1 Capnocytophaga leadbetteri
Capnocytophaga (genus) 4
GCF_002302595.1 Capnocytophaga sputigena
Capnocytophaga (genus) 4
GCF_002302565.1 Capnocytophaga canimorsus
Capnocytophaga (genus) 3
GCF_002302535.1 Capnocytophaga sp. H2931
Capnocytophaga (genus) 3
GCF_002302515.1 Capnocytophaga sp. H4358
Capnocytophaga (genus) 3
GCF_002302495.1 Capnocytophaga sputigena
Capnocytophaga (genus) 4
GCF_002302475.1 Capnocytophaga cynodegmi
Capnocytophaga (genus) 3
GCF_002302445.1 Capnocytophaga canimorsus
Capnocytophaga (genus) 3
GCF_002302415.1 Capnocytophaga gingivalis
Capnocytophaga (genus) 3
GCF_002302395.1 Capnocytophaga sputigena
Capnocytophaga (genus) 4
GCF_002302375.1 Sinorhizobium meliloti
Ensifer (genus) 3
GCF_002302355.1 Sinorhizobium meliloti
Ensifer (genus) 3
GCF_002302335.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002302315.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002300675.1 Klebsiella pneumoniae
Klebsiella (genus) 8
GCF_002291445.1 Brenneria goodwinii
Brenneria (genus) 7
GCF_002291425.1 Gibbsiella quercinecans
Gibbsiella (genus) 7
GCF_002291405.1 Variovorax boronicumulans
Variovorax (genus) 2
GCF_002291265.1 Vibrio anguillarum
Vibrio (genus) 8
GCF_002290305.1 Bacillus subtilis
Bacillus (genus) 10
GCF_002290285.1 Klebsiella michiganensis
Enterobacteriaceae (family) 8
GCF_002290245.2 Vibrio parahaemolyticus
Vibrio (genus) 12
GCF_002290205.1 Salmonella enterica subsp. enterica serovar Saintpaul
Salmonella (genus) 7
GCF_002290185.1 Lactiplantibacillus plantarum
Lactiplantibacillus (genus) 5
GCF_002290085.1 Mesoplasma chauliocola
Mesoplasma (genus) 2
GCF_002290025.1 Enterococcus thailandicus
Enterococcus (genus) 6
GCF_002289205.1 Streptococcus agalactiae
Streptococcus (genus) 7
GCF_002289045.2 Enterococcus faecalis
Enterococcus (genus) 4
GCF_002288585.1 Xanthomonas citri pv. malvacearum
Xanthomonas (genus) 2
GCF_002288565.1 Xanthomonas citri pv. malvacearum
Xanthomonas (genus) 2
GCF_002288545.1 Pectobacterium polaris
Pectobacterium (genus) 7
GCF_002288525.1 Sinorhizobium sojae CCBAU 05684
Ensifer (genus) 3
GCF_002288505.1 Sinorhizobium sp. CCBAU 05631
Ensifer (genus) 3
GCF_002288485.1 Sinorhizobium fredii CCBAU 83666
Ensifer (genus) 3
GCF_002288385.1 Candidatus Planktophila lacus
Actinobacteria (class) 1
GCF_002288365.1 Candidatus Planktophila limnetica
Actinobacteria (class) 1
GCF_002288345.1 Candidatus Planktophila versatilis
Actinobacteria (class) 1
GCF_002288325.1 Candidatus Planktophila lacus
Actinobacteria (class) 1
GCF_002288305.1 Candidatus Nanopelagicus abundans
Actinobacteria (class) 1
GCF_002288285.1 Sphingobium xenophagum
Sphingobium (genus) 3
GCF_002288265.1 Candidatus Planktophila versatilis
Actinobacteria (class) 1
GCF_002288245.1 Taylorella equigenitalis
Taylorella (genus) 3
GCF_002288225.1 Candidatus Planktophila dulcis
Actinobacteria (class) 1
GCF_002288205.1 Taylorella equigenitalis
Taylorella (genus) 3
GCF_002288185.1 Candidatus Planktophila vernalis
Actinobacteria (class) 1
GCF_002288155.1 Taylorella equigenitalis
Taylorella (genus) 3
GCF_002288145.1 Candidatus Planktophila versatilis
Actinobacteria (class) 1
GCF_002288125.1 Taylorella equigenitalis
Taylorella (genus) 3
GCF_002288105.1 Candidatus Planktophila versatilis
Actinobacteria (class) 1
GCF_002288075.1 Streptomyces sp. CLI2509
Streptomyces (genus) 6
GCF_002288065.1 Candidatus Planktophila sulfonica
Actinobacteria (class) 1
GCF_002288045.1 Candidatus Planktophila dulcis
Actinobacteria (class) 1
GCF_002288025.1 Taylorella equigenitalis
Taylorella (genus) 3
GCF_002288005.1 Candidatus Nanopelagicus hibericus
Actinobacteria (class) 1
GCF_002287965.1 Candidatus Planktophila dulcis
Actinobacteria (class) 1
GCF_002287945.1 Lacticaseibacillus rhamnosus DSM 14870
Lacticaseibacillus (genus) 5
GCF_002287925.1 Candidatus Planktophila lacus
Actinobacteria (class) 1
GCF_002287905.1 Lactobacillus gasseri DSM 14869
Lactobacillus (genus) 6
GCF_002287885.2 Candidatus Nanopelagicus limnes
Actinobacteria (class) 1
GCF_002287725.2 Pseudomonas aeruginosa
Pseudomonas (genus) 4
GCF_002287605.1 Mycobacterium intracellulare subsp. chimaera
Mycobacterium (genus) 1
GCF_002287545.1 Vibrio anguillarum
Vibrio (genus) 9
GCF_002287505.1 Corynebacterium glaucum
Corynebacterium (genus) 4
GCF_002286375.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286355.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286335.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286315.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286295.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286275.1 Lactiplantibacillus plantarum
Lactiplantibacillus (genus) 5
GCF_002286255.1 Streptococcus thermophilus
Streptococcus (genus) 6
GCF_002286235.1 Lacticaseibacillus rhamnosus
Lacticaseibacillus (genus) 5
GCF_002286215.1 Lactobacillus acidophilus
Lactobacillus (genus) 4
GCF_002286175.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286155.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286135.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286115.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286095.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286075.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286055.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286035.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002286015.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002285995.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002285975.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002285955.1 Bordetella pertussis
Bordetella (genus) 3
GCF_002285935.1 Aeromonas dhakensis
Aeromonas (genus) 10
GCF_002285905.1 Rickettsia sp. MEAM1 (Bemisia tabaci)
Rickettsia (genus) 1
GCF_002285875.1 Candidatus Portiera aleyrodidarum MED (Bemisia tabaci)
Oceanospirillales (order) 1
GCF_002285855.1 Candidatus Hamiltonella defensa (Bemisia tabaci)
Yersiniaceae (family) 3
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.