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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_002741615.1 Shigella dysenteriae
Escherichia/Shigella (genus) 7
GCF_002741595.1 Escherichia coli O178:H19
Escherichia/Shigella (genus) 7
GCF_002741575.1 Escherichia coli O6:H16
Escherichia/Shigella (genus) 7
GCF_002741555.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002741535.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002741495.1 Escherichia coli O169:H41
Escherichia/Shigella (genus) 7
GCF_002741475.1 Escherichia coli O27:H7
Escherichia/Shigella (genus) 7
GCF_002741455.1 Escherichia coli O128:H27
Escherichia/Shigella (genus) 7
GCF_002741435.1 Escherichia coli O169:H41
Escherichia/Shigella (genus) 7
GCF_002741415.1 Acinetobacter baumannii
Acinetobacter (genus) 6
GCF_002741375.1 Escherichia albertii
Escherichia/Shigella (genus) 7
GCF_002741355.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002741335.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002741315.1 Escherichia coli O25:H16
Escherichia/Shigella (genus) 7
GCF_002741295.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002741255.1 Escherichia coli O114:H49
Escherichia/Shigella (genus) 7
GCF_002741195.1 Escherichia coli O6:H16
Escherichia/Shigella (genus) 7
GCF_002741175.1 Escherichia coli O25:NM
Escherichia/Shigella (genus) 7
GCF_002741075.1 Pseudomonas putida
Pseudomonas (genus) 6
GCF_002741055.1 Paenibacillus ihbetae
Paenibacillus (genus) 9
GCF_002741035.1 Paenibacillus sp. BIHB 4019
Paenibacillus (genus) 8
GCF_002741015.1 Microvirga ossetica
Microvirga (genus) 4
GCF_002736285.1 Mesomycoplasma dispar
Mesomycoplasma (genus) 1
GCF_002736265.1 Streptococcus suis
Streptococcus (genus) 4
GCF_002736205.1 Pedobacter ginsengisoli
Pedobacter (genus) 5
GCF_002736145.1 Collinsella aerofaciens
Collinsella (genus) 5
GCF_002736105.1 Solibacillus sp. R5-41
Solibacillus (genus) 12
GCF_002736065.1 Pseudomonas mosselii
Pseudomonas (genus) 7
GCF_002735945.1 Chromobacterium violaceum
Chromobacterium (genus) 8
GCF_002735245.1 Bartonella henselae
Bartonella (genus) 2
GCF_002735225.1 Aeromonas salmonicida subsp. pectinolytica 34mel
Aeromonas (genus) 10
GCF_002734145.1 Faecalibacterium duncaniae
Faecalibacterium (genus) 6
GCF_002717025.1 Actinoplanes sp. SE50
Actinoplanes (genus) 6
GCF_002716965.3 Mycobacterium avium subsp. hominissuis
Mycobacterium (genus) 1
GCF_002716925.3 Mycobacterium avium subsp. hominissuis
Mycobacterium (genus) 1
GCF_002716905.3 Mycobacterium avium subsp. hominissuis
Mycobacterium (genus) 1
GCF_002716885.1 Escherichia coli O91 str. RM7190
Escherichia/Shigella (genus) 7
GCF_002715865.1 Bifidobacterium asteroides DSM 20089
Bifidobacterium (genus) 2
GCF_002706795.1 Brevibacillus laterosporus DSM 25
Brevibacillus (genus) 11
GCF_002706745.1 Companilactobacillus farciminis KCTC 3681 = DSM 20184
Companilactobacillus (genus) 4
GCF_002706705.1 Loigolactobacillus coryniformis subsp. torquens DSM 20004 = KCTC 3535
Loigolactobacillus (genus) 5
GCF_002706665.1 Bifidobacterium pseudolongum subsp. globosum DSM 20092
Bifidobacterium (genus) 4
GCF_002706565.1 Geobacillus thermodenitrificans
Geobacillus (genus) 10
GCF_002706485.1 Dickeya dianthicola RNS04.9
Dickeya (genus) 7
GCF_002706425.1 Loigolactobacillus coryniformis subsp. coryniformis KCTC 3167 = DSM 20001
Loigolactobacillus (genus) 5
GCF_002706375.1 Lactobacillus amylovorus DSM 20531
Lactobacillus (genus) 5
GCF_002706325.1 Cereibacter sphaeroides
Cereibacter (genus) 3
GCF_002688685.1 Mycoplasmopsis bovirhinis
Mycoplasmopsis (genus) 3
GCF_002688665.1 Streptococcus suis
Streptococcus (genus) 4
GCF_002688605.1 Priestia aryabhattai
Priestia (genus) 14
GCF_002688585.1 Candidatus Fonsibacter ubiquis
Alphaproteobacteria (class) 1
GCF_002688565.1 Acinetobacter sp. LoGeW2-3
Acinetobacter (genus) 7
GCF_002688525.1 Bacillus velezensis
Bacillus (genus) 9
GCF_002633865.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCF_002633845.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCF_002633825.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCF_002633805.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCF_002633785.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCF_002633765.1 Staphylococcus aureus
Staphylococcus (genus) 6
GCF_002632415.2 Bacteroides sp. KFT8
Bacteroides (genus) 5
GCF_002591665.3 Agrobacterium tumefaciens
Agrobacterium (genus) 4
GCF_002591335.1 Streptomyces malaysiensis
Streptomyces (genus) 6
GCF_002591295.1 Pasteurella multocida
Pasteurella (genus) 6
GCF_002591275.1 Chryseobacterium indologenes
Chryseobacterium (genus) 6
GCF_002591255.1 Brucella canis
Brucella (genus) 3
GCF_002591235.1 Pseudomonas sp. FDAARGOS_380
Pseudomonas (genus) 6
GCF_002591215.1 Staphylococcus lugdunensis
Staphylococcus (genus) 6
GCF_002591195.1 Yersinia frederiksenii
Yersinia (genus) 7
GCF_002591175.1 Staphylococcus capitis
Staphylococcus (genus) 6
GCF_002591135.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002591115.1 Klebsiella aerogenes
Klebsiella (genus) 8
GCF_002591095.1 Yersinia frederiksenii
Yersinia (genus) 7
GCF_002591075.1 Klebsiella pneumoniae
Klebsiella (genus) 8
GCF_002589795.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002588845.1 Serratia fonticola
Serratia (genus) 7
GCF_002587885.1 Klebsiella pneumoniae
Klebsiella (genus) 8
GCF_002587225.1 Campylobacter jejuni
Campylobacter (genus) 3
GCF_002587165.1 Klebsiella pneumoniae
Klebsiella (genus) 8
GCF_002587105.1 Campylobacter jejuni
Campylobacter (genus) 3
GCF_002587065.1 Aeromonas sp. CA23
Aeromonas (genus) 10
GCF_002587005.1 Escherichia coli
Escherichia/Shigella (genus) 7
GCF_002586945.1 Faecalibacterium prausnitzii
Faecalibacterium (genus) 6
GCF_002586745.1 Aeromonas sp. CU5
Aeromonas (genus) 10
GCF_002576835.1 Lactiplantibacillus plantarum
Lactiplantibacillus (genus) 5
GCF_002572815.2 Cutibacterium acnes subsp. defendens
Cutibacterium (genus) 3
GCF_002568625.1 Nocardia terpenica
Nocardia (genus) 3
GCF_002557815.1 Listeria monocytogenes
Listeria (genus) 6
GCF_002557795.1 Chitinophaga caeni
Chitinophaga (genus) 4
GCF_002557755.1 Streptococcus pyogenes
Streptococcus (genus) 6
GCF_002557735.1 Listeria monocytogenes
Listeria (genus) 6
GCF_002556585.1 Neisseria meningitidis
Neisseria (genus) 4
GCF_002556565.1 Bacillus velezensis
Bacillus (genus) 7
GCF_002556545.1 Streptomyces formicae
Streptomyces (genus) 6
GCF_002549835.1 Acetobacter tropicalis
Acetobacter (genus) 5
GCF_002549815.1 Ralstonia solanacearum
Ralstonia (genus) 3
GCF_002549795.1 Halomonas beimenensis
Halomonas (genus) 5
GCF_002531755.2 Rhizobium acidisoli
Rhizobium (genus) 3
GCF_002507915.2 Salmonella enterica
Salmonella (genus) 7
GCF_002507875.2 Salmonella enterica
Salmonella (genus) and Enterobacteriaceae (family) 7
GCF_002507865.2 Salmonella enterica
Salmonella (genus) 7
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.