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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCF_000023625.1 Mycobacterium tuberculosis KZN 1435
Mycobacterium (genus) 1
GCF_000023945.1 Halorhabdus utahensis DSM 12940
Halorhabdus (genus) 1
GCF_000024145.1 Chlamydia pneumoniae LPCoLN
Chlamydia (genus) 1
GCF_000024225.1 Lancefieldella parvula DSM 20469
Lancefieldella (genus) 1
GCF_000024465.1 Candidatus Puniceispirillum marinum IMCC1322
Thalassobaculaceae (family) 1
GCF_000024505.1 Anaplasma centrale str. Israel
Anaplasma (genus) 1
GCF_000024845.1 Rhodothermus marinus DSM 4252
Rhodothermus (genus) 1
GCF_000025025.1 Dehalococcoides mccartyi VS
Dehalococcoides (genus) 1
GCF_000025105.1 Thermotoga petrophila RKU-10
Thermotoga (genus) 1
GCF_000025265.1 Conexibacter woesei DSM 14684
Conexibacter (genus) 1
GCF_000025285.1 Archaeoglobus profundus DSM 5631
Archaeoglobus (genus) 1
GCF_000025505.1 Ferroglobus placidus DSM 10642
Ferroglobus (genus) 1
GCF_000025545.1 Thioalkalivibrio sp. K90mix
Thioalkalivibrio (genus) 1
GCF_000025605.1 Thermocrinis albus DSM 14484
Thermocrinis (genus) 1
GCF_000025665.1 Aciduliprofundum boonei T469
Thermoplasmatales (order) 1
GCF_000026005.1 Ehrlichia ruminantium str. Welgevonden
Ehrlichia (genus) 1
GCF_000026025.1 Chlamydia abortus S26/3
Chlamydia (genus) 1
GCF_000026045.1 Natronomonas pharaonis DSM 2160
Natronomonas (genus) 1
GCF_000026445.2 Mycobacterium liflandii 128FXT
Mycobacterium (genus) 1
GCF_000027325.1 Mycoplasmoides genitalium G37
Mycoplasmoides (genus) 1
GCF_000027345.1 Mycoplasmoides pneumoniae M129
Mycoplasmoides (genus) 1
GCF_000050405.1 Ehrlichia ruminantium str. Gardel
Ehrlichia (genus) 1
GCF_000050425.1 Ehrlichia ruminantium str. Welgevonden
Ehrlichia (genus) 1
GCF_000063545.1 Orientia tsutsugamushi str. Boryong
Orientia (genus) 1
GCF_000069025.1 Halobacterium salinarum R1
Halobacterium (genus) 1
GCF_000069185.1 Mycobacteroides abscessus ATCC 19977
Mycobacterium (genus) 1
GCF_000090405.2 Salinibacter ruber M8
Salinibacter (genus) 1
GCF_000090965.1 Buchnera aphidicola BCc
Buchnera (genus) 1
GCF_000092185.1 Thermosphaera aggregans DSM 11486
Thermosphaera (genus) 1
GCF_000092465.1 Staphylothermus hellenicus DSM 12710
Staphylothermus (genus) 1
GCF_000092825.1 Segniliparus rotundus DSM 44985
Segniliparus (genus) 1
GCF_000092845.1 Brachyspira murdochii DSM 12563
Brachyspira (genus) 1
GCF_000092925.1 Ancylobacter novellus DSM 506
Starkeya (genus) 1
GCF_000093165.1 Blattabacterium sp. (Periplaneta americana) str. BPLAN
Flavobacteriales (order) 1
GCF_000143145.1 Hyphomicrobium denitrificans ATCC 51888
Hyphomicrobium (genus) 1
GCF_000143725.1 Brachyspira pilosicoli 95/1000
Brachyspira (genus) 1
GCF_000143845.1 Olsenella uli DSM 7084
Olsenella (genus) 1
GCF_000143965.1 Desulfarculus baarsii DSM 2075
Desulfarculus (genus) 1
GCF_000144915.1 Acidilobus saccharovorans 345-15
Acidilobus (genus) 1
GCF_000145705.1 Mesomycoplasma hyorhinis HUB-1
Mesomycoplasma (genus) 1
GCF_000146025.2 Candidatus Endomicrobiellum trichonymphae
Endomicrobium (genus) 1
GCF_000148385.1 Vulcanisaeta distributa DSM 14429
Vulcanisaeta (genus) 1
GCF_000151105.2 Thermococcus barophilus MP
Thermococcus (genus) 1
GCF_000151205.2 Thermococcus sp. AM4
Thermococcus (genus) 1
GCF_000152265.2 Ferroplasma acidarmanus Fer1
Ferroplasma (genus) 1
GCF_000152825.2 Parvularcula bermudensis HTCC2503
Parvularcula (genus) 1
GCF_000153685.2 Mycobacterium tuberculosis str. Haarlem
Mycobacterium (genus) 1
GCF_000154585.2 Mycobacterium tuberculosis KZN 4207
Mycobacterium (genus) 1
GCF_000154605.2 Mycobacterium tuberculosis KZN 605
Mycobacterium (genus) 1
GCF_000154785.2 Roseobacter litoralis Och 149
Roseobacter (genus) 1
GCF_000157895.3 Mycobacterium kansasii ATCC 12478
Mycobacterium (genus) 1
GCF_000164905.1 Hydrogenobacter thermophilus TK-6
Hydrogenobacter (genus) 1
GCF_000166635.1 Borreliella burgdorferi N40
Borrelia (genus) 1
GCF_000166655.1 Borreliella burgdorferi JD1
Borrelia (genus) 1
GCF_000166935.1 Rickettsia sibirica 246
Rickettsia (genus) 1
GCF_000168875.3 Coxiella burnetii 'MSU Goat Q177'
Coxiella (genus) 1
GCF_000170955.2 Borreliella valaisiana VS116
Borrelia (genus) 1
GCF_000174075.1 Buchnera aphidicola str. LSR1 (Acyrthosiphon pisum)
Buchnera (genus) 1
GCF_000178955.2 Granulicella mallensis MP5ACTX8
Granulicella (genus) 1
GCF_000178975.2 Granulicella tundricola MP5ACTX9
Granulicella (genus) 1
GCF_000179035.2 Mycoplasma suis str. Illinois
Haemobartonella (genus) 1
GCF_000179915.2 Terriglobus saanensis SP1PR4
Terriglobus (genus) 1
GCF_000183185.1 Mesomycoplasma hyopneumoniae 168
Mesomycoplasma (genus) 1
GCF_000183225.1 Buchnera aphidicola str. LL01 (Acyrthosiphon pisum)
Buchnera (genus) 1
GCF_000183285.1 Buchnera aphidicola str. JF99 (Acyrthosiphon pisum)
Buchnera (genus) 1
GCF_000185985.2 Candidatus Blochmanniella vafra str. BVAF
Enterobacterales (order) 1
GCF_000186365.1 Desulfurococcus mucosus DSM 2162
Desulfurococcus (genus) 1
GCA_000186985.3 Mycoplasma haemofelis Ohio2
Haemobartonella (genus) 1
GCF_000187005.1 Thermus scotoductus SA-01
Thermus (genus) 1
GCF_000189555.1 Saccharolobus islandicus REY15A
Saccharolobus (genus) 1
GCF_000189575.1 Saccharolobus islandicus HVE10/4
Saccharolobus (genus) 1
GCF_000190315.1 Vulcanisaeta moutnovskia 768-28
Vulcanisaeta (genus) 1
GCF_000191925.1 Chlamydia psittaci 6BC
Chlamydia (genus) 1
GCF_000192315.1 Helicobacter pylori 2017
Helicobacter (genus) 1
GCF_000192335.1 Helicobacter pylori 2018
Helicobacter (genus) 1
GCF_000193185.2 Mycobacterium tuberculosis W-148
Mycobacterium (genus) 1
GCF_000193375.1 Thermoproteus uzoniensis 768-20
Thermoproteus (genus) 1
GCF_000194625.1 Archaeoglobus veneficus SNP6
Archaeoglobus (genus) 1
GCF_000195085.1 Candidatus Pelagibacter sp. IMCC9063
Alphaproteobacteria (class) 1
GCF_000195295.1 Desulfobacca acetoxidans DSM 11109
Desulfobacca (genus) 1
GCF_000195735.1 Rickettsia prowazekii str. Madrid E
Rickettsia (genus) 1
GCF_000195835.3 Mycobacterium tuberculosis variant bovis AF2122/97
Mycobacterium (genus) 1
GCF_000195855.1 Mycobacterium leprae TN
Mycobacterium (genus) 1
GCF_000195875.1 Mycoplasmopsis pulmonis UAB CTIP
Mycoplasmopsis (genus) 1
GCF_000195915.1 Thermoplasma acidophilum DSM 1728
Thermoplasma (genus) 1
GCF_000195935.2 Pyrococcus abyssi GE5
Pyrococcus (genus) 1
GCF_000195955.2 Mycobacterium tuberculosis H37Rv
Mycobacterium (genus) 1
GCF_000196075.1 Tropheryma whipplei TW08/27
Tropheryma (genus) 1
GCF_000196115.1 Rhodopirellula baltica SH 1
Rhodopirellula (genus) 1
GCF_000196215.1 Borreliella bavariensis PBi
Borrelia (genus) 1
GCF_000196355.1 Nitrosospira multiformis ATCC 25196
Nitrosospira (genus) 1
GCF_000196895.1 Halalkalicoccus jeotgali B3
Halalkalicoccus (genus) 1
GCF_000200735.1 Mycoplasma haemofelis str. Langford 1
Haemobartonella (genus) 1
GCF_000203215.1 Mycoplasma suis KI3806
Haemobartonella (genus) 1
GCF_000204135.1 Chlamydia pecorum E58
Chlamydia (genus) 1
GCF_000204255.1 Chlamydia psittaci 6BC
Chlamydia (genus) 1
GCF_000204925.1 Metallosphaera cuprina Ar-4
Metallosphaera (genus) 1
GCF_000211295.1 Mesomycoplasma hyorhinis MCLD
Mesomycoplasma (genus) 1
GCF_000211475.1 Pyrococcus sp. NA2
Pyrococcus (genus) 1
GCF_000213215.1 Acidianus hospitalis W1
Acidianus (genus) 1
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.