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16S copy number statistics
# Genomes Range Mode Median Mean Std dev
48700 1 - 22 7 6.0 5.5 2.8
2025-04-08T16:40:59.619433 image/svg+xml Matplotlib v3.6.3, https://matplotlib.org/
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Data source record id Data source organism name NCBI scientific name (mouse over) RDP taxa 16S copies
GCA_027945135.1 Candidatus Phytoplasma oryzae
Mariniplasma (genus) 2
GCA_027594465.1 Candidatus Phytoplasma sacchari
Acholeplasmataceae (family) 2
GCA_026153535.1 Sphingobacterium sp. KU25419
Sphingobacterium (genus) 6
GCA_025839675.1 Candidatus Lokiarchaeum ossiferum
Archaea (domain) 3
GCA_025340205.1 Ignicoccus pacificus DSM 13166
Ignicoccus (genus) 1
GCA_020544305.1 Staphylococcus taiwanensis
Staphylococcus (genus) 4
GCA_020541285.1 Candidatus Gillettellia cooleyia
Enterobacterales (order) 1
GCA_018866225.1 Candidatus Minimicrobia naudis
Saccharibacteria_genera_incertae_sedis (genus) 1
GCA_015100165.3 Candidatus Phytoplasma asiaticum
Mariniplasma (genus) 2
GCA_014302835.1 Pedobacter sp. PAMC26386
Pedobacter (genus) 2
GCA_009936135.1 Candidatus Chazhemtobacterium aquaticus
Bacteria (domain) 1
GCA_004295685.1 Fluviispira sanaruensis
Fluviispira (genus) 5
GCA_001956655.2 Staphylococcus epidermidis
Staphylococcus (genus) 6
GCA_001747005.2 Cyanobacterium sp. IPPAS B-1200
Cyanobacterium (genus) 3
GCA_001077535.2 Clostridioides difficile ATCC 9689 = DSM 1296
Clostridioides (genus) 12
GCA_000826925.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_000826905.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_000474035.1 synthetic Escherichia coli C321.deltaA
Escherichia/Shigella (genus) 7
GCA_000186985.3 Mycoplasma haemofelis Ohio2
Haemobartonella (genus) 1
GCA_000146265.4 Aggregatibacter actinomycetemcomitans D11S-1
Aggregatibacter (genus) 6
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** Some records inherited from rrnDB 3.1.277 only have copy number information for the 23S rRNA but not the 16S rRNA. In these cases, indicated by "n/a", a 16S copy number interpolated from the 23S count is used when searching by 16S copy number, in the above statistics display and when sorting the above table by the 16S column.